Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00451 ATGCGTTCCTTCCCATTGTTCCTATTACTCCCAACTATCTTTTGCCTTCCCATACATGGCCTTGACTTTCTAACTGCAACGAATAAATCATCCTCGGCATTCTATAATTGTACAAACAATGGTACTTTTGCACCCAATAGCGCCTACTATTTCAACCTTAAAACTCTGCTATCTTGGCTTTCCTCCAATACCACTAACAATGCCGGATTCTTTAACGCCACAGTTGCTGGAAGAAGCACTTCAGACACTGTACATGGCTTCTTCTACTGTCGAATAGAGGCTGTGCCAGAGAGCTGTCAAGAGTGCGTGAAGGAAGCAGCCAAATTAATACCATCCCTGTGTCCTGAGGCAAAAGAAGCCATGATTTGGCATGCACTATGCTTTCTGCGCTACTCTAATCGCTCTTTCATCTCCACAGTGGAAGAAAGTCCTAAAATGTCCTTCATGAACAAGCAGGATTATGTGGGCGAGGTTGGCTACTTCAATACTAAACTCTGGGATATCATGAATGATCTGAGAATTCAGACTGCTAAAACTCCAAATGGCTCtaagaaaatttcatacaagTCAGTGAAAATCACAGATAACCAAACTCTATATGGTGCGGCTTGGTGTATGCCCTACTTATCACCCGAGAACTGCAGTTGGTGCCTAGGTGATGCCGTGGCAGAAATTCCAACGTCCTGTTGCAGAGGAAAAACAGGAGGAACAGTTGTATATCCCAGTTGTGGGGTTAGATATGAACTATATCCAATTTACAGGACACTTAACTTAGCCCCGCTACCAACGCCTGCATCTCCTCGGCCTTTCACTCAAGCAGTTGGAAATGATGTTACAACTCTGGAATCCTTACGATTTGACTTTGACGAAATTGAAGCAGCAACAAACAACTTTTCTGCAGTAAACAGAATAGGCAAAGGTGGATTCGGAGAGGTTTACAagGGTATTCTTCCAGATGGACAAGAAATAGCTGTAAAGCGGCTAATAGGCACTTCAGGGCAAGGTACTGAAGAATTTAAGAATGAGGTTCTTGTTATAGCCAAACTTCAACACAGAAACCTTGTGAGGAAAGTCTGTTCTTATGAATCAGAGTATCTTGAAGACATCCAGACATATGCTTGGATAAAATGGAGTGAGCAAACCCCACTGGAGTTGTTGGATTCAACTTTGAAAGAATCTTATTCTCAAGATGAAGTCATTAAATGCATCCATATAGGTTTATTATGTGTTCAGGAGGATCCAAACGACAGACCTACCATGGCAACAGTTATGTCCTCTCTCAACAGCCCTTCACTTGACCTGCCATTACCTCATGAACCAGTATATTTCAAGCGTAGTATAAGAGAGGACAATGGGCCCAGCAAGGAACTGGATTCTATAAGTAAATGTACCCACGAATTAACAGTAACTAATCTTTTGCCCCGATA 1427 0.4198 MRSFPLFLLLPTIFCLPIHGLDFLTATNKSSSAFYNCTNNGTFAPNSAYYFNLKTLLSWLSSNTTNNAGFFNATVAGRSTSDTVHGFFYCRIEAVPESCQECVKEAAKLIPSLCPEAKEAMIWHALCFLRYSNRSFISTVEESPKMSFMNKQDYVGEVGYFNTKLWDIMNDLRIQTAKTPNGSKKISYKSVKITDNQTLYGAAWCMPYLSPENCSWCLGDAVAEIPTSCCRGKTGGTVVYPSCGVRYELYPIYRTLNLAPLPTPASPRPFTQAVGNDVTTLESLRFDFDEIEAATNNFSAVNRIGKGGFGEVYKGILPDGQEIAVKRLIGTSGQGTEEFKNEVLVIAKLQHRNLVRKVCSYESEYLEDIQTYAWIKWSEQTPLELLDSTLKESYSQDEVIKCIHIGLLCVQEDPNDRPTMATVMSSLNSPSLDLPLPHEPVYFKRSIREDNGPSKELDSISKCTHELTVTNLLPR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00451 475 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Bva13g00451 475 Gene3D Phosphorylase Kinase; domain 1 269 367 - -
Bva13g00451 475 ProSiteProfiles Protein kinase domain profile. 298 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00451 475 SUPERFAMILY Protein kinase-like (PK-like) 278 364 IPR011009 -
Bva13g00451 475 Pfam Protein tyrosine and serine/threonine kinase 301 358 IPR001245 GO:0004672|GO:0006468
Bva13g00451 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 274 356 - -
Bva13g00451 475 ProSiteProfiles Gnk2-homologous domain profile. 142 252 IPR002902 -
Bva13g00451 475 Gene3D - 145 251 IPR038408 -
Bva13g00451 475 Gene3D - 30 136 IPR038408 -
Bva13g00451 475 SUPERFAMILY Protein kinase-like (PK-like) 370 445 IPR011009 -
Bva13g00451 475 SMART tyrkin_6 298 427 IPR020635 GO:0004713|GO:0006468
Bva13g00451 475 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 356 475 - -
Bva13g00451 475 ProSiteProfiles Gnk2-homologous domain profile. 31 136 IPR002902 -
Bva13g00451 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 255 - -
Bva13g00451 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 356 475 - -
Bva13g00451 475 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 25 255 - -
Bva13g00451 475 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 274 356 - -
Bva13g00451 475 Pfam Salt stress response/antifungal 37 133 IPR002902 -
Bva13g00451 475 Pfam Salt stress response/antifungal 159 250 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00451 Bva-Chr13 2074581 2077484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00451 303 453 Receptor kinase-like Gene Family AT4G05200 32.919 3.27e-22 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g00451 Stress-antifung 6.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00451 - - gmx:100793219 411.379