Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00449 ATGCTGCCCTTCAAAGTTTCTGCTActatctctttctctgttCTCCTCTGCTTGATTTCCAGCATAACCACCATTAAAGCAGCTCCCGAATacctttctcatttttgtcCAAACAGCACCACTTTCTCTCCTAATACCACCTACGCCACCAATCTTGGTAATCTATTTTCTTGGCTTTCCGCAAATTCCACCCGCGACAATGGTTACTACAATACCACCACCGGCACCACCAACAGCCCTGGAAACATCGTATACGGCGCCTTTCTCTGTCGGGGAGATCTCTCCACCAATGAATGCCAAGAATGTGTTTCAACAGCTGCTAAAGCAGTGCGTGAAAGGTGTCCTGAAGAGAAAGAGTCTGTCATTTGGTACGCCGAGTGTATGTTACGTTACTCGAACCAGTCCTTCTTCTCTGTACCTTCATCTGTCCCTATGGTGTTTCTGTTCAACACTGCTAATGTCTCTGAGCAGACTCGCTTTAACCAGCTCTTGGGTGACACCATAAAACAAGCGGCGAATCAAGCAGCAAACGGCGGAGCTGACAAGAAATTTGCTACCAAGGATGCAAACTTCACCAGCTTCATAACCCTGTACACACTTGCACAGTGCACGCCGGATTTATCTGTGCAAGACTGTAATACATGCCTTGAAGGAGCAATTGCAAATCTGCCCATCTGCTGCGATGGAAAACAAGGAGGAAGAGTTTTGATTCCCAGTTGTAATATCCGGTATGAAGTGTACCCGTTTTACCACAATGTATCACCATCGGTGCCTACCCCAGAAAAACCAAGGCCAACACCAAAAGTTTATGCAGAAAAATCCAGGTCAACAGGGACAATCCTAGCAATTGTGATTCCAATTGTGCTTTCTTTGCTGCTTTTCTTCATATGCTGCTGGCTTATAAGTAGAAGGCCGAAAAAGGAGTACAACTCAGTTTCACTTTCAGGAGAAAATgTCGAAATTTCAAACGAAGACTTATTGCAACTTGATTTGGATACAATAAAAGTGGCCACAAACAACTTCTGCGAGGACAACAAATTAGGCGAAGGGGGATTTGGTGAGGTTTACAAGGGTTCATTGCCTAATGGGTTAGATATTGCGGTAAAGAGGCTATCAAGCAGTTCTCgacaaggaagagaagagTTTAAGAATGAGGTGCTTTTGGTAGCGAAACTCCAACATAGAAATCTGGTCAGACTATTGGGATTTTGTTTGGATggggaagaaaaaattctCGTCTATGAATATGTTCCCAACAAAAGTCTAGACCATTTTCTATTTGATCCTGAAAAGCAACAACTATTGAATTGGTCGAGACGGATTTTTGGTGTTGATCAAACTCAAGGAAATACAAGTAGAATTGTGGGAACATTAGGTTATATGCCTCCAGAATATGCAATGCATGGACACATTTCTGTGAAAATAGATGTGTATAGCTTTGGCATTCTGGTTCTTGAGATAATATGTGGCCAGAAGAACACGTCCTTCAATGAGTCAGGAACTTCTGAGGACCTAGTGAATTATGCTTGGAAGAACTGGATAGGGGGCACACCGTTGGCATTGTTGGATGCGACTCTTGAAGCTTCTTATTCAAGAGATGAAGTAATTAGATGCGTCCATATTGGGTTATTGTGTGTTCAGGAAGACCCGGCTCGAAGGCCAACAATGCAGCAAATAGTTCTCTTGCTCAACAGTTACTCTATCAGTCTAGCAACGCCTGAACGTCCTCCATCTTATCTCCATAGCCAAACACAGCCAAGCTTTCCAACTAAGGGACTGGATTTTGATAAGTCTACAACCAAGTCAACGTCAGCCAATGTTGACGAAGCATCCATTACTGGGGTGTACCCTCGGTA 1856 0.4213 MLPFKVSATISFSVLLCLISSITTIKAAPEYLSHFCPNSTTFSPNTTYATNLGNLFSWLSANSTRDNGYYNTTTGTTNSPGNIVYGAFLCRGDLSTNECQECVSTAAKAVRERCPEEKESVIWYAECMLRYSNQSFFSVPSSVPMVFLFNTANVSEQTRFNQLLGDTIKQAANQAANGGADKKFATKDANFTSFITLYTLAQCTPDLSVQDCNTCLEGAIANLPICCDGKQGGRVLIPSCNIRYEVYPFYHNVSPSVPTPEKPRPTPKVYAEKSRSTGTILAIVIPIVLSLLLFFICCWLISRRPKKEYNSVSLSGENVEISNEDLLQLDLDTIKVATNNFCEDNKLGEGGFGEVYKGSLPNGLDIAVKRLSSSSRQGREEFKNEVLLVAKLQHRNLVRLLGFCLDGEEKILVYEYVPNKSLDHFLFDPEKQQLLNWSRRIFGVDQTQGNTSRIVGTLGYMPPEYAMHGHISVKIDVYSFGILVLEIICGQKNTSFNESGTSEDLVNYAWKNWIGGTPLALLDATLEASYSRDEVIRCVHIGLLCVQEDPARRPTMQQIVLLLNSYSISLATPERPPSYLHSQTQPSFPTKGLDFDKSTTKSTSANVDEASITGVYPR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00449 618 ProSiteProfiles Gnk2-homologous domain profile. 142 249 IPR002902 -
Bva13g00449 618 MobiDBLite consensus disorder prediction 575 618 - -
Bva13g00449 618 Gene3D Phosphorylase Kinase; domain 1 304 416 - -
Bva13g00449 618 SUPERFAMILY Protein kinase-like (PK-like) 328 585 IPR011009 -
Bva13g00449 618 Pfam Protein tyrosine and serine/threonine kinase 344 434 IPR001245 GO:0004672|GO:0006468
Bva13g00449 618 ProSiteProfiles Protein kinase domain profile. 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00449 618 ProSiteProfiles Gnk2-homologous domain profile. 30 136 IPR002902 -
Bva13g00449 618 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Bva13g00449 618 Gene3D Transferase(Phosphotransferase) domain 1 419 572 - -
Bva13g00449 618 Pfam Salt stress response/antifungal 36 134 IPR002902 -
Bva13g00449 618 Pfam Salt stress response/antifungal 153 246 IPR002902 -
Bva13g00449 618 Gene3D - 28 136 IPR038408 -
Bva13g00449 618 Gene3D - 144 249 IPR038408 -
Bva13g00449 618 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 440 613 - -
Bva13g00449 618 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 25 440 - -
Bva13g00449 618 Pfam Protein kinase domain 449 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00449 618 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 440 613 - -
Bva13g00449 618 MobiDBLite consensus disorder prediction 575 610 - -
Bva13g00449 618 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00449 Bva-Chr13 2059653 2064203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00449 4 618 Receptor kinase-like Gene Family AT4G05200 45.803 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g00449 Pkinase 3.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00449 - - csin:114306417 673.7