Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00447 ATGGTTACTACAACCCCACCACCGGCACGACCAGCAGCCCTGGAAACATCGTATACGGCGCCTTTCTCTGTCGGGGAGATCTCTCTACCAATGAATGCCAAGACTGTGTTTGAACCGCTGCTAAAGCAGTGCGTGAAAGGTGTCTTGAAGAGAAAGAGTCTGTCTTTTGGTACGACGAGTAGTCGCTTTAACCAGCTGTTGGGTGACACCATAAAACAAGCGGCGAATCAAGCATCAAACGGCGGAGCTGACAAGAAATTTGCTACCAGGGATGCAAACTTCACCAGCTTCATAACCCTGTACACACTTGCACAGTGCACGCCGGATTTATCTGTGCAAGACTGTAATACATGCCTTGAAGGAGCAATTGCAAATCTGCCCATCTGCTGCGATGGAAAACAAGGAGGAAGAGTTTTGATTGCCAGTTGTAATATCCGGTATGAAGTGTATCCGTTTTACCAAAACACATCTCAATCGGTGCGTCCACCAAGTCCAACACCAAAAGGAAAATCCACGTTGTCAACAGGGACAATCTTAGCGATTGTAATTCCGATTGTGCTTTCTttattgcttttcttcttcatctgctGCTGGCTTATTTTAACTAGAAAGGCGAAGAAGAAGTGCACGGCAATGCCAGAAGAAAGTGttgaaatttcaaatgaagACTTATTGCAACTTGATTTGGATACGATAAAAGTGGCCACAAACAACTTCTGCGAGGACAACAAATTAGGTGAAGGGGGGTTTGGGGAGGTTTACAAGGGTACACTGCCTAATAGGATAGATATTGCTGTCAAGAGGCTATCAAGCGGTTCTCGACAAGGAGGAGAAGAGTTTAAGAATGAGGTGGATGTATATAGCTATGGCATCTTAGTTCTTGAGATATTAAGTGGCAAGAAGAACACCTCCTTCAATGAATCAGGAAATTCTGAAGACCTTCTGAATTATGCTTGGAAAAACTGGAAAGATGGGACACCGTTGGCATTGTTGGATGCGACTCTTGAATCTTGTTACTCGAGAGATGAAGTAATTAGATGCATCCATATTGGGTTACTATGTGTTCAGGAAGACCCAGTTCAAAGGCCAACAATGCAGCAAATAGTTCTCATGCTTAATAGTTACTCTACTAGTCTTGCAATGCCTGAACGTCCTCCATCTTTTCTCGTTGGCAGAACACAGCCAAGCTTTCCAACCATGGGGCTGGATTCTAAGTCTACATCCAAGTCAGTCTCAGCCAGTGTTGATGAAGCATCCATTACTGGGGTGTACCCTCGATA 1280 0.4344 MVTTTPPPARPAALETSYTAPFSVGEISLPMNAKTVFEPLLKQCVKGVLKRKSLSFGTTSSRFNQLLGDTIKQAANQASNGGADKKFATRDANFTSFITLYTLAQCTPDLSVQDCNTCLEGAIANLPICCDGKQGGRVLIASCNIRYEVYPFYQNTSQSVRPPSPTPKGKSTLSTGTILAIVIPIVLSLLLFFFICCWLILTRKAKKKCTAMPEESVEISNEDLLQLDLDTIKVATNNFCEDNKLGEGGFGEVYKGTLPNRIDIAVKRLSSGSRQGGEEFKNEVDVYSYGILVLEILSGKKNTSFNESGNSEDLLNYAWKNWKDGTPLALLDATLESCYSRDEVIRCIHIGLLCVQEDPVQRPTMQQIVLMLNSYSTSLAMPERPPSFLVGRTQPSFPTMGLDSKSTSKSVSASVDEASITGVYPR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00447 426 SUPERFAMILY Protein kinase-like (PK-like) 279 395 IPR011009 -
Bva13g00447 426 SUPERFAMILY Protein kinase-like (PK-like) 222 284 IPR011009 -
Bva13g00447 426 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 75 284 - -
Bva13g00447 426 MobiDBLite consensus disorder prediction 399 426 - -
Bva13g00447 426 ProSitePatterns Protein kinases ATP-binding region signature. 245 267 IPR017441 GO:0005524
Bva13g00447 426 MobiDBLite consensus disorder prediction 399 417 - -
Bva13g00447 426 Pfam Salt stress response/antifungal 58 149 IPR002902 -
Bva13g00447 426 ProSiteProfiles Gnk2-homologous domain profile. 45 152 IPR002902 -
Bva13g00447 426 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 285 425 - -
Bva13g00447 426 Gene3D - 50 152 IPR038408 -
Bva13g00447 426 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 75 284 - -
Bva13g00447 426 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 285 425 - -
Bva13g00447 426 Gene3D Transferase(Phosphotransferase) domain 1 207 381 - -
Bva13g00447 426 Gene3D Phosphorylase Kinase; domain 1 249 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00447 Bva-Chr13 2054372 2056922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00447 285 426 Receptor kinase-like Gene Family AT4G05200 47.586 1.99e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g00447 Stress-antifung 2.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00447 - - cit:102622618 233.802