Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00441 ATGGCTGTTAAGGATGGTTTCTTCAAGACCACCGCAGGCCAGCAGGGAACCCCCGACTCCGTCAACGGACTTTTTCTCTGCCGTGGCGATGTCACCGCCGTCGTCTGTCAAGAGTGTGTCACCGCCGCCGCCAAAGAGATAACACGCCACTGCCCCAAGGACACCGAGTCCCTTATCTGGTACGATGATTGTATGTTGCGTTACAGTAACGATACCTTTGACATCAAAGTCCCCGGAACGTACATGGAGGCCAATAAGAGCATCGCTGACTCGGACCAGGATCTGTTCAATCAATGGTTGGCACGCTTGTTGAATGATTTGGCAAAGAAAGCTGCGAATTCTCCGtcggaaaaaaagaagttcgCTACTGGAGAAGAGAACTTCACGATGTCGCAGACGCTATATGGTCTAGCGCAGTGTACTCCCGACTTGTCTGCTTTCGACTGTAATATGTGTTTACAAAGCGCCATTGCTTACTTTCCAATTTGCTGTGATGGACAACAGGGTGCACGGGCCTTGTTTCCGGGATGCAATATGAGATACGAACTGTACCCATTTTACAATATTACTGCAAGTTCATCTACACCGGTGGTACCTCCTCGTTCAGGTGGAAGTCAAATCTCATTGGTTGTTGGGATTATTGTTCCGGTTGTTGCTGTGGCACTTTTTGTTCTGGGTTGCTGTTTCCTGCGTAAAAGGGCAAGCAAGAAGAAGCATAATACAGCAATGCATGATGGAATTGATCTCACAGATGTAGAGTCTTTACATTTTGACTTGGCTACAATTGAAGATGCAACGAACAGATTCTCTGATGAGATGAAGATTGGCCAAGGTGGATTTGGTGTGGTTTATAagGGTATCCTTACTAACAGACTAGAGATAGCTGTGAAGAGGTTGGCAGCAACCTCCTCACAGGattttggcATGGCAAAGACTTTCGGTGTAGATCAAACTGAAGTAAATACTTCAAGAATTGCTGGAACTTATGGTTATATGTCTCCAGAATATGCAATGCGTGGACAATACTCTGTGAAATCTGATGTGTTCAGCTTTGGTGTCTTAGTGTTAGAGATTATTAGTGGTAGGAAGAACACTGAATTTTATCAATCACAACATGCTGATGATCTCTTGAGCTATGCTTGGAAGAATTGGTCGAATCAAACACCTTCAGAATTGTTAGATCCAACAGTGAGAGATTGTTATTCTAGGAACGAAGTCATTAGATGCATCCAGATTGGTTTACTATGTGTTCAGGAAAATCCAGCAGACAGGCCATCAATGGCAAATATTGTACTTGTGCTTAACAGTTATTCGGTTACATTGCAATTGCCCAGACAGCCGGCGTCTTTCCTGCGTGGAAGAACACCAGACAGGCTTAGAAATGATCTTGAATCTGATCAGTCATCTGCTAGTTCCGCAATTCTGTGGTCAGTGAACGATTCATCTATCACTCAAGTGTATCCGCGATG 1469 0.4398 MAVKDGFFKTTAGQQGTPDSVNGLFLCRGDVTAVVCQECVTAAAKEITRHCPKDTESLIWYDDCMLRYSNDTFDIKVPGTYMEANKSIADSDQDLFNQWLARLLNDLAKKAANSPSEKKKFATGEENFTMSQTLYGLAQCTPDLSAFDCNMCLQSAIAYFPICCDGQQGARALFPGCNMRYELYPFYNITASSSTPVVPPRSGGSQISLVVGIIVPVVAVALFVLGCCFLRKRASKKKHNTAMHDGIDLTDVESLHFDLATIEDATNRFSDEMKIGQGGFGVVYKGILTNRLEIAVKRLAATSSQDFGMAKTFGVDQTEVNTSRIAGTYGYMSPEYAMRGQYSVKSDVFSFGVLVLEIISGRKNTEFYQSQHADDLLSYAWKNWSNQTPSELLDPTVRDCYSRNEVIRCIQIGLLCVQENPADRPSMANIVLVLNSYSVTLQLPRQPASFLRGRTPDRLRNDLESDQSSASSAILWSVNDSSITQVYPR 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00441 489 Pfam Salt stress response/antifungal 91 184 IPR002902 -
Bva13g00441 489 Pfam Salt stress response/antifungal 8 70 IPR002902 -
Bva13g00441 489 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Bva13g00441 489 SUPERFAMILY Protein kinase-like (PK-like) 258 452 IPR011009 -
Bva13g00441 489 ProSiteProfiles Gnk2-homologous domain profile. 1 73 IPR002902 -
Bva13g00441 489 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 3 305 - -
Bva13g00441 489 ProSiteProfiles Gnk2-homologous domain profile. 76 186 IPR002902 -
Bva13g00441 489 Gene3D - 1 73 IPR038408 -
Bva13g00441 489 Gene3D - 80 186 IPR038408 -
Bva13g00441 489 ProSiteProfiles Protein kinase domain profile. 70 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00441 489 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 306 488 - -
Bva13g00441 489 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 306 488 - -
Bva13g00441 489 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 305 - -
Bva13g00441 489 Pfam Protein tyrosine and serine/threonine kinase 306 432 IPR001245 GO:0004672|GO:0006468
Bva13g00441 489 Gene3D Transferase(Phosphotransferase) domain 1 248 302 - -
Bva13g00441 489 Gene3D Transferase(Phosphotransferase) domain 1 303 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00441 Bva-Chr13 2034645 2037734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00441 6 489 Receptor kinase-like Gene Family AT4G23280 37.589 3.50e-106 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g00441 PK_Tyr_Ser-Thr 7.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00441 - - lja:Lj0g3v0096479.1 340.117