Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00440 ATGATTGGTGAGATGAATTCCTTAAAGTTTTCTGCAATAACCCACTATGTAATTCTTTCTCTGCTTGGATTACTTAGCTTTAGAAGAGAAGCAGCTCCGACTTACGGCACTCATTTCTGCTCAAACACATCGCATTTCGAACCCAACAGTACACTTCAATCCAATTTGAATATTCTCCTCTCTTTTCTCACCTCCAACGTCTCCCTCCATGATGGTTTCTTCAAGACCACCGCAGGCCAGCAGGGAACTCCCGACTGTGAAAACGGACTTTTTCTCTGCCGTGGCGACGTCACTGCTGCCATCTGTCAAGAGTGTGTCACCGCCGCGTCCAAAGAGATAATACGGCGCTGCCCCAAGGACACCGAGTCCATTATCTGGTACGATGATTGTATGTTGCGATACAGTAACAATTCCTTTAACAACATAGTCCCACAAACGTCCTTGTGGGCCAATAAGAGAATCGCTGACTCGGACCAGGATCGGTTCAATCAATTGTTGGCGAGCTTGTTGAATGATTTGGCAAAGAAAGCTGCCAATTCTCCGACGGATCAGAAGAAGTTCGCTACCGGAGAAGTGAAATTCACAACGTCGCAGACGCTATATGGTCTATCGCAGTGTACTCCCGATTTGTCGACTTTTCACTGTAATGAGTGTTTCCGAAGCGCCATAGCTGGTCTTCCAACGTGCTGTGCTGAACAACTGGGTGCAAGATCTCTACTTCCGGGTTGTAATGTCAGATACGAACAATACCCATTTTACAATATTACTGCAAGTTCATCTGTACCTCGTTCAGTAGGAAAGCACATCTCATTAATTGTTGGGATTATTGTTCCAATTGTTGTTTCTGCGGCACTTTCCGTTCTGGGCTTCTGTTTCCTGAGAAAGAGGGCAATCAAGAAGTATAATACTATCGTGGAGGATGGAttTAAGAATGATCTTCCTGATGTAGAGTCTTTGCATATTGACTTGGCTACCATTGAAGCTGCAACGAACAGATTCTCGGATGAGATGAAGATTGGCCAAGGTGGATTTGGTGCGGTTTATAAGgGTAACCTTAATAGACAGGAGATAGCTGTGAAGAGGTTGTCAGCAACCTCCATAGAGGGTGCAGCAGACTTCAAGAATGAAGCTGCTATTGTGGCCAGGCTTCAACATAGAAATTTAGCTGAAGTAAATACTCAAAGAATAATTGGAACTTAtggTTATATGTCTCCAGAATATGTAATGCGTGGACAATACAGTATAAAATCTGATGTGTACAGCTTTGGTGTCTTAGTGTTGGAGATTGTTAGTGGCAAAAAGAACACAGAATTGTATCAATCACAACATGCTGAGGATCTCTTGAGTTATGCTTGGAAGAATTGGACGAATCAAACACCTTTAGAATTGTTAGATCCCACATCGAGAGATTCTTATTCTCGGAACGAAGTCATTAGATGCATCCAGATTGGTTTATTATGTGTTCAAGAAAATCCAGCAGACAGGCCTTCAATGGCAAATGTTGCACTTGTGCTTGATAGTTATTCGGTTACTTTGCAATTACCACGACAACCGGCGTCTTTCCTTCATGGAAGAACACCAAACAAACATGCCAAGAAGTG 1601 0.4297 MIGEMNSLKFSAITHYVILSLLGLLSFRREAAPTYGTHFCSNTSHFEPNSTLQSNLNILLSFLTSNVSLHDGFFKTTAGQQGTPDCENGLFLCRGDVTAAICQECVTAASKEIIRRCPKDTESIIWYDDCMLRYSNNSFNNIVPQTSLWANKRIADSDQDRFNQLLASLLNDLAKKAANSPTDQKKFATGEVKFTTSQTLYGLSQCTPDLSTFHCNECFRSAIAGLPTCCAEQLGARSLLPGCNVRYEQYPFYNITASSSVPRSVGKHISLIVGIIVPIVVSAALSVLGFCFLRKRAIKKYNTIVEDGFKNDLPDVESLHIDLATIEAATNRFSDEMKIGQGGFGAVYKGNLNRQEIAVKRLSATSIEGAADFKNEAAIVARLQHRNLAEVNTQRIIGTYGYMSPEYVMRGQYSIKSDVYSFGVLVLEIVSGKKNTELYQSQHAEDLLSYAWKNWTNQTPLELLDPTSRDSYSRNEVIRCIQIGLLCVQENPADRPSMANVALVLDSYSVTLQLPRQPASFLHGRTPNKHAKK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00440 533 ProSiteProfiles Gnk2-homologous domain profile. 142 252 IPR002902 -
Bva13g00440 533 ProSitePatterns Protein kinases ATP-binding region signature. 339 360 IPR017441 GO:0005524
Bva13g00440 533 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Bva13g00440 533 Pfam Salt stress response/antifungal 157 250 IPR002902 -
Bva13g00440 533 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Bva13g00440 533 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 388 - -
Bva13g00440 533 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 390 530 - -
Bva13g00440 533 Gene3D Phosphorylase Kinase; domain 1 295 391 - -
Bva13g00440 533 Gene3D Transferase(Phosphotransferase) domain 1 392 517 - -
Bva13g00440 533 ProSiteProfiles Protein kinase domain profile. 333 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00440 533 Gene3D - 145 252 IPR038408 -
Bva13g00440 533 Gene3D - 33 139 IPR038408 -
Bva13g00440 533 SUPERFAMILY Protein kinase-like (PK-like) 322 520 IPR011009 -
Bva13g00440 533 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 388 - -
Bva13g00440 533 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 390 530 - -
Bva13g00440 533 Pfam Protein tyrosine and serine/threonine kinase 337 391 IPR001245 GO:0004672|GO:0006468
Bva13g00440 533 Pfam Protein tyrosine and serine/threonine kinase 400 502 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00440 Bva-Chr13 2030851 2033781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00440 33 525 Receptor kinase-like Gene Family AT4G23280 37.368 9.75e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g00440 PK_Tyr_Ser-Thr 7.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00440 - - gra:105775117 449.514