Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00428 ATGGACCCAGAGTTGAGGAGTGTGGTTCCAGGTGCTAAAGCCATGATGGAGGCTGGGCATTTCGAGCCAGTGCACGCGAGTTTGAATGATGACGAGTGCACAACCACAATGGCTGTTGTTTCTTTAGTGCCGCTTTCATTTCTTGGTTTCCTTCTCAATCTTGCATCCCAAGTCGCCGCTCAGCCCCGATACGTTAAATGTGTCGAAGAAAGAGGTAACTTTACCACTACTTCAACCTTCAAGACTAACCTCGATACCCTCTTGGCCAACCTCACTTCCAGTACCCAAATTAACTATGGCTTCTACAACTTGTCTTACGGCCAAAATCCTGATGAAGTCAGTGTAATTGGTCTGTGCAGAGGAGATTTGGAGCCAGATGTTTGCCGTAGTTGCCTCAACGAAGCTCGATCGTTTCTCCCACAGAACTGTTCAAACAATAAGGAAGCAATTGTGTTTTATGACACTTGCATGCTGCGGTACTCAAACCGCGCAATATTGGGTGTCATGGAAGATAGTCCCTGGTACTATTTTTGGGAAGGAAATAATGTGACAGATGTAAATCAGTACAAAGCAGATCTAAACAAATTGCTGGGAGAACTAGGAAGCAAAGCAGCATCTGGTGACTCCCGTCTGAAGTTTGCTACTGGAAATGTAGCAGGTCCaaactttcaaaatatatacgCCCTTGTGCAGTGCACCCCTGATTTGTCTGCTCAAATCTGTCGAAACTGCTTGGATATGGCTTTCTCCGAAATCTATAAATGCTGTGATCGCAAGGGAGCTGTAGGAATTGGGAGACCAAGCTGTACTGTCAGATATAGGAACAGCATCTTCTATGAAACTGCTGTTCCAGACGTCACAACACCTCCAGCTTCTACAACAATCACACAAGGAAAGAGCAATAGATTACGATTAGTCATTGCCATAGTCGTGCCTGTAGTTTCCTTCATCACACTAGTCATCTTTGTCAGCATCTATTTAAGAGTGAGAAAgtcaaagaaatatattgaaGCTGAAGTTGATGGCGAAATTATATCTGTCGAACAATTGCAATTCAACTATGACACTATCAAAGATGCAACGAATGACTTCTCTGATGAAAACAAGGTTGGACAAGGGGGTTATGGACCCGTTTACAAGGGAAGGCTTTCTGATGGAAGAGAGATTGCTGTCAAAAGATTGTCTATGAATTCTAGCCAAGGAGATGCAGAATTTAAGAATGAAGTTATGTTAGTGGCAAAGCTTCAGCACCGTAATTTGGTTAGGCTTCTTGGATTCTGTttggaaagaaaggaaaggctTCTTATCTATGAGTATGTTCCTAATAAAAGTCTTGATAAGTTCATATTTGATCCAACCAAGAATGCAGAAATAGattttggCATTGCTAAACAAGTTGTTATGGATCAAACTCACGAAAGTACAAACACGATTGTTGGAACTTATGGATATATGGCTCCTGAATATGCAATGCATGGACAATTCTCATCGAAATCAGATGTATATAGTTTTGGTGTATTGATTCTTGAGATCGTAAGCggatacaaaattaataacccCATTGGCCAGAATGAAGAATATCTGATTAGCTTTGTCTGGAAAAACTGGAGAAAAGGGACAGCCTTAAATATTGTAGACCCTAATTTAATTGGTGGTTCAACAAATGAAGTAATAAGATGCATCCACATTGGTTTACTCTGTGTTCAAGATAATGTAGCTGATAGACCAACCATGGCTTCTGTTGTTCTCATGCTTAACAGCTCTACCACCACTCTTGCAATACCCTCAGAGCCTGCATTTTTCATCAATACTGGAAATCTATCAGCCTTGCAGTCAGAGGAGTATAATTCGGAATCAGCAGGAAAAAATGAACCTGTTCAAGCATTAAAAACTGAGGCTTCAATTTCTGACCTATATCCTCGCTA 1925 0.399 MDPELRSVVPGAKAMMEAGHFEPVHASLNDDECTTTMAVVSLVPLSFLGFLLNLASQVAAQPRYVKCVEERGNFTTTSTFKTNLDTLLANLTSSTQINYGFYNLSYGQNPDEVSVIGLCRGDLEPDVCRSCLNEARSFLPQNCSNNKEAIVFYDTCMLRYSNRAILGVMEDSPWYYFWEGNNVTDVNQYKADLNKLLGELGSKAASGDSRLKFATGNVAGPNFQNIYALVQCTPDLSAQICRNCLDMAFSEIYKCCDRKGAVGIGRPSCTVRYRNSIFYETAVPDVTTPPASTTITQGKSNRLRLVIAIVVPVVSFITLVIFVSIYLRVRKSKKYIEAEVDGEIISVEQLQFNYDTIKDATNDFSDENKVGQGGYGPVYKGRLSDGREIAVKRLSMNSSQGDAEFKNEVMLVAKLQHRNLVRLLGFCLERKERLLIYEYVPNKSLDKFIFDPTKNAEIDFGIAKQVVMDQTHESTNTIVGTYGYMAPEYAMHGQFSSKSDVYSFGVLILEIVSGYKINNPIGQNEEYLISFVWKNWRKGTALNIVDPNLIGGSTNEVIRCIHIGLLCVQDNVADRPTMASVVLMLNSSTTTLAIPSEPAFFINTGNLSALQSEEYNSESAGKNEPVQALKTEASISDLYPR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00428 641 ProSiteProfiles Protein kinase domain profile. 364 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00428 641 Gene3D Transferase(Phosphotransferase) domain 1 448 595 - -
Bva13g00428 641 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 50 459 - -
Bva13g00428 641 SUPERFAMILY Protein kinase-like (PK-like) 352 603 IPR011009 -
Bva13g00428 641 Gene3D - 62 164 IPR038408 -
Bva13g00428 641 Gene3D - 172 278 IPR038408 -
Bva13g00428 641 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 50 459 - -
Bva13g00428 641 Pfam Salt stress response/antifungal 182 275 IPR002902 -
Bva13g00428 641 Pfam Salt stress response/antifungal 67 162 IPR002902 -
Bva13g00428 641 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 459 620 - -
Bva13g00428 641 MobiDBLite consensus disorder prediction 614 641 - -
Bva13g00428 641 Gene3D Phosphorylase Kinase; domain 1 326 439 - -
Bva13g00428 641 Pfam Protein tyrosine and serine/threonine kinase 367 452 IPR001245 GO:0004672|GO:0006468
Bva13g00428 641 Pfam Protein tyrosine and serine/threonine kinase 459 582 IPR001245 GO:0004672|GO:0006468
Bva13g00428 641 ProSiteProfiles Gnk2-homologous domain profile. 62 165 IPR002902 -
Bva13g00428 641 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 459 620 - -
Bva13g00428 641 ProSiteProfiles Gnk2-homologous domain profile. 171 278 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00428 Bva-Chr13 1982750 1986113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00428 67 641 Receptor kinase-like Gene Family AT4G21410 41.374 6.74e-154 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g00428 PK_Tyr_Ser-Thr 2.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00428 - - gmx:113000773 659.448