Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00425 ATGGCAGCAACAATGGCTATGGTCTCTATCAGATTGCTTTcgtttttctgtttctttggCATACTCATATCTCAAGCCACTGTTCAGCCAAGCTTCCTATCCAACCACTGTATGAATGATAAAGGAAACTACACAGCTAACAGTACCTATCAGACCAATCTCAATACCCTTTTGTCCAATCTTTCTTCCAATACACAAGTTGACTATGGCTTCTATAATTTCTCTCTTGGAGAAAACTCTGATCAAGTTAATGCAATTGGGCTGTGCAGAGGAGACATTAAGCCAGATGTTTGCCGAAGTTGCCTTAATGATTCGAGAGTGTTTCTCACGCAGCTGTGTCCAAATCAGAAGGAGGCAATTGGTTGGTATGACAATTGCATGCTACGCTACTCAAACAGCTCAATATTTGGCATCATGGAAGCTTCACCTAACTTCTATGTGCCCAGCCCCAATAATACAACAGAGGAATTCAATCAAGTACTTACAGATTTTCTGGATAGACTAAGAAGCAAAGCTGCATCTGGTGATTCCCTTCGAAAGTATGCTGCAGCAAACACAACAGGTTCAAGCTCTCAAACTATATATGGTCTTGTGCAGTGTACGCCCGATTTATCTGAGCAAGAATGCAATGACTGCTTGGTTGGGGCTATCTCAGAATGTTGTGATGGCAAGGGTGGTGGTAGAGTTTTCAGACCTAGCTGTATGTACAGATATGAAACCTTCCGCTTTTCTGAACCTACAGCCGACACACCACTACTATCACCTCCACAAGTGTCTCCTTCTCCTCCTCCCTCTACTAATAACAATTCCACAGAAGGGCAGAGCAACACATCACGAACTTTCATTGCCGTTGCTGTGCCAGCCGTTTCCTTTGTTCTACTTCTTATCTTCATCTGCATCTATTTAAGACTCAGAAAATCAAggacaaaatttgaaaGAGCTAAAGCAGAGACTGATGATGAAATTACAACTATAGAGTCGAAGCAATTTGACTTTGACTACATCAAAGTTGCTACAAATAACTTTGCTGATTCTAATAAGCTTGGACAAGGAGGATTTGGGACTGTTTACATGGGTAGGCTCCCCAATGGACAAGAGATTGCTGTCAAAAGAATTGTTGGGACCTGTGGATATATGGCTCCTGAGTATGCAATGCATGAAAATTTCTCAGTAAAATTAGATGTCTTTAGTTTTGGCGTATTGGTTTTAGAAATCGTTTGTGGGCACAAAAATACTAGCATCCGTGGTGGGGAAGATGTAGAGAATTTACTGACCATTGTATGGAGAAACTGGAGAGAAAGAACTACCTCAAATATTATAGATCCCACATTAGGTAATGGTTCAAGTGAAATGATGAGATGTATACACATTGGTTTGCTCTGTGTTCAAGAAAATACAGCTGACAGACCAACCATGGGTACTGTAGTACGCATGCTTGACAActtctctctcactctctcaGTACCTTCAGAACCTGCATTTTTTATGGATAGTAGAAGTTTATCAAGCATGCAATCATCGGAGTACAGTTCAAGGGCAACTGGATCAAGTGAATTAAGAAGCAATTCTATTCCAAACCCTGAATCAATTAATGAAGCTTCAATTACTGAGTTGTATCCTCGTTA 1625 0.3951 MAATMAMVSIRLLSFFCFFGILISQATVQPSFLSNHCMNDKGNYTANSTYQTNLNTLLSNLSSNTQVDYGFYNFSLGENSDQVNAIGLCRGDIKPDVCRSCLNDSRVFLTQLCPNQKEAIGWYDNCMLRYSNSSIFGIMEASPNFYVPSPNNTTEEFNQVLTDFLDRLRSKAASGDSLRKYAAANTTGSSSQTIYGLVQCTPDLSEQECNDCLVGAISECCDGKGGGRVFRPSCMYRYETFRFSEPTADTPLLSPPQVSPSPPPSTNNNSTEGQSNTSRTFIAVAVPAVSFVLLLIFICIYLRLRKSRTKFERAKAETDDEITTIESKQFDFDYIKVATNNFADSNKLGQGGFGTVYMGRLPNGQEIAVKRIVGTCGYMAPEYAMHENFSVKLDVFSFGVLVLEIVCGHKNTSIRGGEDVENLLTIVWRNWRERTTSNIIDPTLGNGSSEMMRCIHIGLLCVQENTADRPTMGTVVRMLDNFSLTLSVPSEPAFFMDSRSLSSMQSSEYSSRATGSSELRSNSIPNPESINEASITELYPR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00425 541 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Bva13g00425 541 SUPERFAMILY Protein kinase-like (PK-like) 322 372 IPR011009 -
Bva13g00425 541 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 371 522 - -
Bva13g00425 541 Pfam Protein tyrosine and serine/threonine kinase 377 478 IPR001245 GO:0004672|GO:0006468
Bva13g00425 541 Gene3D Transferase(Phosphotransferase) domain 1 332 488 - -
Bva13g00425 541 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 372 - -
Bva13g00425 541 Pfam Salt stress response/antifungal 37 132 IPR002902 -
Bva13g00425 541 Pfam Salt stress response/antifungal 152 240 IPR002902 -
Bva13g00425 541 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Bva13g00425 541 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 371 522 - -
Bva13g00425 541 MobiDBLite consensus disorder prediction 506 541 - -
Bva13g00425 541 MobiDBLite consensus disorder prediction 247 274 - -
Bva13g00425 541 Gene3D - 30 134 IPR038408 -
Bva13g00425 541 Gene3D - 145 243 IPR038408 -
Bva13g00425 541 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Bva13g00425 541 SUPERFAMILY Protein kinase-like (PK-like) 372 514 IPR011009 -
Bva13g00425 541 MobiDBLite consensus disorder prediction 506 533 - -
Bva13g00425 541 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00425 Bva-Chr13 1968320 1971649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00425 371 541 Receptor kinase-like Gene Family AT4G21410 51.149 1.30e-44 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g00425 PK_Tyr_Ser-Thr 1.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00425 - - gmx:113000773 426.787