Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00409 ATGTGGCTTGTAGAAGCTTATCATTTAAAGTGCGTGCGAGCATTGTTGAGCTTGATTCTCCCGTTGGCACTCTCCGGCTCGGCTCGGTTGCAACCCAAACCATTGTTGTCAAGAGCTTACCTGGgTACATCGGGATCGGAGAGTCACTTCATCGAGTCAGGGGAGCAACCGGCAGATGACCCTCTTCTGCTTTGTCTTGGCGGAGGTCCTGGTTGCTCAGCTCTCTCTGCTCTCCTCTATCAAATTGGTCCACTATCTTTCAACTATAACAAATCTAGAGAAGGGCACAAACCAGTTCTAGAGTTGAACCACTACTCCTGGActaagGTTGCCAATATAATTTTCTCGGATTCACCCGCGGGCACTGGATTTTCATATTCACAAAATTCAGAACGATGCAACACGAGTGATAAAAAATCCGTAGAGCTGGCATATGAGTTTCTCAGAAAGGACTTATTATTCCAGCCTTTGTCAAGAAAATTGCGGAAggtaagTGACGCAGATAGAGGCATAGCAGGAATCAAGCTcggaGGTTATATTCTAGGAAACCCCTTCACTGATGTCAAATATGACATAAATTCTAGAGTTAACTTTGCTCACAGATTTGCCCTTATAGATGATGAAATCTACGAGGCAGCAGAAGTGTATTGCAGTGGCGAGTACGTTCATCCAAATACAAGTGATTCCGAATGTACAGTGTATCTAAAGATAATTGATCTATGcttgaaagatatatatagtCCAATGATATTGGAACCAACGTGTAGCATATCCTCTCTACAACTAGGACCCAAAATTCTGGAGTGGCCTCTGGGAGTTAATCCCTCAGAAGACCTCCTTTCAGATTTTAATCCATGGGAGAAACTATGGTGCCGGAACTATTACTATTTGTTTGTAAACGTTTGGGCTAATGACAAAGCCGTGCAAGAAGCTCTGCATGTTAGAAACGTACTAAGTAGCCTTCCTTACCATCGTAACTTCACCAACGATGACCTTCGAGCTCTGATTTACagTGGAGATCATGATCTGATTATTCCTTTCCTGGGAACATATGAATGGATACAATCTCTGAATTTAAGTGTTTCTACCGATGATGAATGGAGGCCATGGTTTGTCGATGGGCAGATTGGAGGTTTTATGGAGCTTTATAAGGAGAAAAAGTACGGCATAACATTTAGTACTGTGCAGGGAGCAGGGCACACGGCCCCAGAGTACAAGCCCAAGGAAACTTGTGAAATGATACGCAGGTGGCTTGCCTATTACTTTGTGTA 1271 0.4241 MWLVEAYHLKCVRALLSLILPLALSGSARLQPKPLLSRAYLGTSGSESHFIESGEQPADDPLLLCLGGGPGCSALSALLYQIGPLSFNYNKSREGHKPVLELNHYSWTKVANIIFSDSPAGTGFSYSQNSERCNTSDKKSVELAYEFLRKDLLFQPLSRKLRKVSDADRGIAGIKLGGYILGNPFTDVKYDINSRVNFAHRFALIDDEIYEAAEVYCSGEYVHPNTSDSECTVYLKIIDLCLKDIYSPMILEPTCSISSLQLGPKILEWPLGVNPSEDLLSDFNPWEKLWCRNYYYLFVNVWANDKAVQEALHVRNVLSSLPYHRNFTNDDLRALIYSGDHDLIIPFLGTYEWIQSLNLSVSTDDEWRPWFVDGQIGGFMELYKEKKYGITFSTVQGAGHTAPEYKPKETCEMIRRWLAYYFV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00409 423 ProSitePatterns Serine carboxypeptidases, histidine active site. 390 407 IPR033124 GO:0004185
Bva13g00409 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 126 IPR001563 GO:0004185|GO:0006508
Bva13g00409 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 103 115 IPR001563 GO:0004185|GO:0006508
Bva13g00409 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 390 403 IPR001563 GO:0004185|GO:0006508
Bva13g00409 423 Gene3D alpha/beta hydrolase 157 421 IPR029058 -
Bva13g00409 423 Gene3D alpha/beta hydrolase 36 155 IPR029058 -
Bva13g00409 423 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 170 422 - -
Bva13g00409 423 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 49 153 - -
Bva13g00409 423 Pfam Serine carboxypeptidase 172 418 IPR001563 GO:0004185|GO:0006508
Bva13g00409 423 Pfam Serine carboxypeptidase 50 150 IPR001563 GO:0004185|GO:0006508
Bva13g00409 423 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 170 422 IPR001563 GO:0004185|GO:0006508
Bva13g00409 423 SUPERFAMILY alpha/beta-Hydrolases 49 421 IPR029058 -
Bva13g00409 423 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 153 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00409 Bva-Chr13 1893550 1896606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00409 295 419 Calmodulin-binding Proteins AT2G22960 41.259 4.35e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00409 K16296 - jre:108983123 381.719