Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00408 ATGACTTCCAATAATCAGCAGCAACAGAACATGATCTCCATCTTCGGCAGAAGCAAGATCATTGTGCTTTCACTGTTTGTAGTGCTTCTACTTACCCTTTTTCACTTGGCAACATCACAATCCACCATAACCAGTCTGCCAGGTTTTCCTGGAAAACTTCCATTCAAACTCGAAACAGGGTATGTGGGAGTGGGGGATGCAGATAGTGTTCGGCTGTTCTACTATTTCGTTGAGTCTGAAAGAGAACCAAACTATGACCCTCTGGTGCTTTGGCTTACTGGAGGTCCTGGCTGTTCTGGATTGTCAGCTCTCTTCTATGAAATTGGCCCATTAAAATTTGACGTTGAAGACTTTGATGGGATTTTCCCAAATCTGGGACTAAACGAGTACTCATGGACAAAGGTTGCCAGTATATTATTTGTGGATGCACCAGTTGGCACTGGATTTTCCTATGCAAAAACTTCAGAAGGTTACAATGTATCAGATACAATCTCAGCAGCCCAAACCTATGAATTCTTGCGTAAGTGGCTTATCGATCATCAAAAATTCTTGTCAAACCCACTCTACATAGGTGGTGACGGCTATGCTGGCATAACTGTTCCAATTATAGCCCAAGAAGTATTAACTGGTAATAAGAATGGAAATTTTCCTCGAGTTAGTCTCCAGGGCTATTTGCTTGGAAACCCACTTACAGATACCTATACTGATCCCAACTCAAGAGTGGAGTATGCTTACCGAGTGAACCTTTTACCTGTAGAACTGTATTTGGCTGCCAAAACCAGCTGCAATGCAAGTTATGTGAATGTTGATCCAGAGAATGTGGAATGTCTTGATAATCTCGGTGCCATCGAAGATTGCTTAagcaaattgaattttgcaCAAATACTAGAACCCAGTTGTTATCCCTTACTTTCTCCTAAACAAAATGTAATCAAATGGGACCGAAGATTTCCTGAAGAAGACGCCATAGAAACCCTTATGTCAAATGGCTCAAGACCACACTATCCTGAGCTATGGTGCAGGGTTCAAAACTATATCCCATCCTATATTTGGGCTAATGATAAAGGTGTCCAAGATGCTCTCCGTGTCCAAAATGGAACAGTTGAGGAGTGGGTTAGATGTAATAATTCATTGTCTTACACCTATAATGTCAACAGCAGTGTTGcttatcatcaaaatcttaCAAAGTCTACATATAGAGCTCTGATTTACAGTGGTGACCAAGACCTTCTAGTTCCATATGTGGGCACCCTCCAATGGATCAGATCCCTGAATTTATCTGTAGCGAATGTTTGGCAACCATGGTTTTTGGATGGCCAAGTTGCAGGATACACGGTGGAATATGCAGAGAGACTATACGAGCTAACTTATGCTACGGTTAAGGGAGCTGGAACCACAGCACCAGAATATAAGCCTAAACCAAGCTTAGCTATGGTGGATCGATGGTTTgcacattattttctttg 1466 0.4079 MTSNNQQQQNMISIFGRSKIIVLSLFVVLLLTLFHLATSQSTITSLPGFPGKLPFKLETGYVGVGDADSVRLFYYFVESEREPNYDPLVLWLTGGPGCSGLSALFYEIGPLKFDVEDFDGIFPNLGLNEYSWTKVASILFVDAPVGTGFSYAKTSEGYNVSDTISAAQTYEFLRKWLIDHQKFLSNPLYIGGDGYAGITVPIIAQEVLTGNKNGNFPRVSLQGYLLGNPLTDTYTDPNSRVEYAYRVNLLPVELYLAAKTSCNASYVNVDPENVECLDNLGAIEDCLSKLNFAQILEPSCYPLLSPKQNVIKWDRRFPEEDAIETLMSNGSRPHYPELWCRVQNYIPSYIWANDKGVQDALRVQNGTVEEWVRCNNSLSYTYNVNSSVAYHQNLTKSTYRALIYSGDQDLLVPYVGTLQWIRSLNLSVANVWQPWFLDGQVAGYTVEYAERLYELTYATVKGAGTTAPEYKPKPSLAMVDRWFAHYFL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00408 488 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 18 487 - -
Bva13g00408 488 Gene3D - 340 486 - -
Bva13g00408 488 Pfam Serine carboxypeptidase 47 484 IPR001563 GO:0004185|GO:0006508
Bva13g00408 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Bva13g00408 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Bva13g00408 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Bva13g00408 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Bva13g00408 488 SUPERFAMILY alpha/beta-Hydrolases 42 486 IPR029058 -
Bva13g00408 488 Gene3D alpha/beta hydrolase 37 309 IPR029058 -
Bva13g00408 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 487 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00408 Bva-Chr13 1889826 1892926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00408 351 484 Calmodulin-binding Proteins AT2G22960 47.015 6.06e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00408 K16296 - qsu:111997409 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00408 13 1889826 1892926 Bva13g00408 13 1889826 1892926 ECH