Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00382 ATGGAGTCTGCAGGGTGTATTTCTGAAGAATGGGGTTCCCTCAGCGGAGTCAACACAGCTGAGGAAGCTGATTTCATGACCCACTTACTTGGTGACTGTTCAGTCCCAATTGAGCTATATGCAAATTCTAATCTGGGAATTCTATCTCCATTTTTCCCTGGTCATGAATCCACAATAGTGAGCGTGACAGGCATCAATAACACTTCCTTTGATCCTTCAAAACCTGAAAATAGTACTAATTTTCTCTGTTTCTCCCAAGGGAGAAGTTGCAGCGCTGGTAGTAGTAGTACAAGTAGTGAAAACTACTTCTCCAGTGACTGCCACCCAGTTCAGGTAACTAACATTGGCTCCATGTTCACGGGCTTTTGCGTGGGGGATGCCAAGATTAGCCCTTTTAGTTTTCAACGCAATGACCATTTAAGCCAACAGAATAATGAAAGCATTAACGAAGAGTCAAGGGTTCATCTTGCTGACAAGAATTTGCAGGCTAGCAGAGAATGTGAAATGCTAGTTTCCGAACCTTCAGAAGACTATAAAAGCAACAATCTTGGGAACACACGAAAAAGATCCAAGAGTTCAATAGAGGTTGCAAAGAACAAGAGAAATgttaaatcaaagaagaatGGACAGTCTGTCTCCGTAAGCAAAAATGAAGAGGATGGAAGCCCTGGCCTTCAGGGACAGAGCTCAAGCAGTTGCAGCTCAGAGGATAAATCCAATGCATCTCATGAGCTAAATGGAGGGACTTCAATGGGTGCCGTACCTCTCAAGTTGAATGGTAAATCAGCGGAAATTAGAGGTCCTGCAACTGATCCACAGAGCCTCTATGCTAGAagaagaagagaaagaataaatgaaagaCTGAGAATCCTACAGAACCTTGTCCCCAATGGAACCAAGGTAGTTGATATTAGCACCATGCTTGAGGAAGCTGTCCAATATGTGAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGCTCTGATGATCTATGGATGTATGCTCCAATTGCTTACAACGGTATGAACATTGGACTAGACCTCAATATCACCCCAACCAAACAACCATA 1067 0.4171 MESAGCISEEWGSLSGVNTAEEADFMTHLLGDCSVPIELYANSNLGILSPFFPGHESTIVSVTGINNTSFDPSKPENSTNFLCFSQGRSCSAGSSSTSSENYFSSDCHPVQVTNIGSMFTGFCVGDAKISPFSFQRNDHLSQQNNESINEESRVHLADKNLQASRECEMLVSEPSEDYKSNNLGNTRKRSKSSIEVAKNKRNVKSKKNGQSVSVSKNEEDGSPGLQGQSSSSCSSEDKSNASHELNGGTSMGAVPLKLNGKSAEIRGPATDPQSLYARRRRERINERLRILQNLVPNGTKVVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDLNITPTKQP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00382 355 MobiDBLite consensus disorder prediction 171 255 - -
Bva13g00382 355 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 350 - -
Bva13g00382 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 318 IPR011598 GO:0046983
Bva13g00382 355 Gene3D - 272 332 IPR036638 GO:0046983
Bva13g00382 355 MobiDBLite consensus disorder prediction 206 247 - -
Bva13g00382 355 SMART finulus 274 324 IPR011598 GO:0046983
Bva13g00382 355 Pfam Helix-loop-helix DNA-binding domain 278 319 IPR011598 GO:0046983
Bva13g00382 355 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 5 350 - -
Bva13g00382 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 272 334 IPR036638 GO:0046983
Bva13g00382 355 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00382 Bva-Chr13 1784514 1786020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00382 1 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 37.931 4.91e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g00382 HLH 6.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00382 - - gmx:100817334 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00382 13 1784514 1786020 Bva13g00382 13 1784514 1786020 ECH