Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00381 ATGGAGCCTGCAGAGTGCATTTCTGAAGAATGGAGTTCTCTTAGTGGATTCTACACAGCTGAGGAAGCTGACTTTATGACCCAGTTGCTTGGTAACTCTTCAGTTTCTGTCCTAAATAATGGGCTAAATGGAAATTCCGATTTTGGAATTCCATCTGCAATTTGGCCTGCCACTGAATCCGCAATAGTGAGCATGACAGGCATCGGCAACACTTGTTTGAATCCCTCAAATGCTAATGATCCTAACCTTTTTTGTTTACTACAAGGTGATAGTTGCAATAGTTATAGTAATACTACTAAGAGTGGCGAAAACTATTCCTCTAGTGAAAACTGCATTGGCTCCTTGTCCATGGGTTTTTGCTTGGAGGATGCCAACATTAGCCATTATAGTGTCCAAGGCATTGGTCTATTGAGCCAAGTGATAAATGAAAACATTGATCAAGAGTCAGAAgaggatgaaagaaaaatcacgcAGAACTCAGCAAAGCGATCCAGGAGCACAACAGAGGCCccaaagaacaagaaaaatgttagATCTAAGAAGATGCCAAAATCTGCCTCTGTTGGCAAAAATGTCAATGAAGATGATGGATGCCCTGGTCTTCAGGGACAGCGCTCAAGCAGTTGCTGCTCAGAGGATGAATCCGATGCTTCTCAGGAGCTAAATGGAGGGGCTTCTTCAAGTCTTAGCCCAAAAGACCCAGCAGCTCTCAAGTTGAATGGAAAAGCAAGAGCTACAAAAGGTTCTGTCGCCGACCCACAGAGCCTCTATGCTAGaagaagagaaagaataaatgaaagatTGAGAATCCTACAGAACCTTGTCCCCAATGGAACCAAGGTTGATATTAGCACCATGCTTGAGGAAGCTGTCCAATATGTGAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGCTCTGATGATCTATGGATGTATGCTCCAATTGCTTACAACGGGATGAACATTGGACTTGAACTCAATATCACCCCAACCAAACAACCATA 1004 0.4054 MEPAECISEEWSSLSGFYTAEEADFMTQLLGNSSVSVLNNGLNGNSDFGIPSAIWPATESAIVSMTGIGNTCLNPSNANDPNLFCLLQGDSCNSYSNTTKSGENYSSSENCIGSLSMGFCLEDANISHYSVQGIGLLSQVINENIDQESEEDERKITQNSAKRSRSTTEAPKNKKNVRSKKMPKSASVGKNVNEDDGCPGLQGQRSSSCCSEDESDASQELNGGASSSLSPKDPAALKLNGKARATKGSVADPQSLYARRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLELNITPTKQP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00381 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 248 297 IPR011598 GO:0046983
Bva13g00381 334 Gene3D - 258 311 IPR036638 GO:0046983
Bva13g00381 334 MobiDBLite consensus disorder prediction 200 229 - -
Bva13g00381 334 SMART finulus 255 303 IPR011598 GO:0046983
Bva13g00381 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 259 314 IPR036638 GO:0046983
Bva13g00381 334 CDD bHLH_AtIND_like 252 311 - -
Bva13g00381 334 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 147 329 - -
Bva13g00381 334 Pfam Helix-loop-helix DNA-binding domain 259 298 IPR011598 GO:0046983
Bva13g00381 334 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 147 329 - -
Bva13g00381 334 MobiDBLite consensus disorder prediction 148 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00381 Bva-Chr13 1775988 1777500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00381 10 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 39.295 1.68e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g00381 HLH 8.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00381 - - ccaj:109795401 340.887