Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00376 ATGAGCTGCAACGGTTGTCGTGTCCTGCGAAAAGGTTGCAGCGACGATTGCATGCTCCGGCATTGCTTTCGCGGGATTGACAACCCACAAGCTGAATCTCACGCCACTATCTTCGTCGCCAAGTTCTTCGGCCGCGCCACCCTCATGTCTTTCCTCTCCTCTGTTCCCGCAAACCAAAGATCTGCTTTGTTTCAGTCACTATTGTATGAAGCGGTGGGACGCACTATAAATCCGGTGACTGGAGCAGTGGGGTTGCTCAGCACTGGCAATTGGCATCTCTGCCACTTGGCGGTGGAAACGGTGCTCCGAGGTGGTGTTTTGAGCCCGCTCCCTCAGCTCTGTGCTGACGCGGAGAACTTTCAACTGCATGATCAGTTTCGGTTCAGACCGGGTTTAGTAATGATAGGCGGGGGAAGGAGAAGTCAGCAACCAAAGAAGCGGCGGGCGGCGACACCCTCTGAGGAGTCTGAAACGACGACGTTGGCAAGTAGCGCAGTAGACTGTGCTGCACAAGGCGGAGGCGGCGGTAATCAAAGGAAACTCCTCACTCTCTTTTTCtg 560 0.5464 MSCNGCRVLRKGCSDDCMLRHCFRGIDNPQAESHATIFVAKFFGRATLMSFLSSVPANQRSALFQSLLYEAVGRTINPVTGAVGLLSTGNWHLCHLAVETVLRGGVLSPLPQLCADAENFQLHDQFRFRPGLVMIGGGRRSQQPKKRRAATPSEESETTTLASSAVDCAAQGGGGGNQRKLLTLFF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00376 186 MobiDBLite consensus disorder prediction 137 162 - -
Bva13g00376 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 186 - -
Bva13g00376 186 PANTHER LOB DOMAIN PROTEIN 1 186 - -
Bva13g00376 186 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bva13g00376 186 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00376 Bva-Chr13 1746990 1747662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00376 1 113 AS2 family AT3G49940 71.681 5.80e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva13g00376 LOB 4.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00376 - - gmx:100816269 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00534 08 2747519 2748830 Bva13g00376 13 1746990 1747662 BWGD
Bva13g00376 13 1746990 1747662 Bva13g00376 13 1746990 1747662 ECH
Bva13g00376 13 1746990 1747662 Bva14g00468 14 2249345 2250082 ECH
Bva10g00654 10 5631738 5632725 Bva13g00376 13 1746990 1747662 ECH