Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00363 atgaTGTTACGTTTGTGCTACAGGCCGCTGGAGCTTTGTTTTGGCTGGCGAGGCGGTGGCGACGGCGATGAACTTCTCTGGCACACGGACTTGAAGCCTCATGCCTCCGGCGACTTCTCCATAGCTGTGGCTCAGGCCAATTACAGTCTTGAAGATCAGAGCCAAGTCTTCACGTCCCCTTCCGCCATATACATCGGTGTCTATGATGGCCATGGCGGACCTGAAGCTTCCAGATTCGTCAACAAACgtctttttccttatttgcacaAATTTGCCACTGAGCAAGGGGGATTGTCAGAGGAAGTCATAAAAAAGGCATTTAATGCAACCGAGGAAGAATTCTTGCATTTAGTGAGGCGATCATTGCCCATAAGTCCCCAAATAGCTTCAGTAGGGTCCTGCTGTCTTCTTGGTGCGATTTCTGATAATGTGTTGTATGTGGCGAACCTTGGAGATTCCAGAGCAGTTCTTGGCCGGAGAGATTCCGAGAGAAAGAAATGCCCAATAGTAGCTGAGTGCTTGTCCACTGATCATAATGTAGCGTTTGAAGAGGTGAGGAAGGAGGTTCAAGCACTTCATCCTGATGACTCGCACATTGTAGTTTTAACCCGTGGAGTTTGGAGGATTAAAGGTATTATACAGGTTTCAAGATCTATTGGTGATGTGTATCTTAAGAGACCTGATTTTTACAAAGACCCAGTTTTTCAACAATTTGGAAACTCTGTTCCCTTGAAGCGTCCGGTGATGACAGCTGAACCATCAATCATTGTTAGAGGTCTTGAGCCTGAAGATTTATTCCTGATATTTGCATCAGATGGCCTTTGGGAACACTTGACTAATGAAACAGCAGTGGAGATTGTTTTCAAACATCCGAGAGCTGGAATTGCTAAGAGATTAGTGAGGGCTGCTATTCATGAAGCtgcaaagaagagagagatgagATATGATGacataaagaaaattgacaaGGGAATAAGACGGCATTTCCATGATGATATCACTGTCGTTGTAATTTATCTTGATCACCAAAAGGGCCCCTCCAGTGGCAGATTTAAGGACAGTAGTCTTGGCTGCACCACTGCTCCTGTTGACATTTTCTCCTTAAATGCGGATGAAGCAGAACAGAGAATACTTGATGCTGCTGCCTA 1148 0.4321 MMLRLCYRPLELCFGWRGGGDGDELLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSAIYIGVYDGHGGPEASRFVNKRLFPYLHKFATEQGGLSEEVIKKAFNATEEEFLHLVRRSLPISPQIASVGSCCLLGAISDNVLYVANLGDSRAVLGRRDSERKKCPIVAECLSTDHNVAFEEVRKEVQALHPDDSHIVVLTRGVWRIKGIIQVSRSIGDVYLKRPDFYKDPVFQQFGNSVPLKRPVMTAEPSIIVRGLEPEDLFLIFASDGLWEHLTNETAVEIVFKHPRAGIAKRLVRAAIHEAAKKREMRYDDIKKIDKGIRRHFHDDITVVVIYLDHQKGPSSGRFKDSSLGCTTAPVDIFSLNADEAEQRILDAAA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00363 382 ProSiteProfiles PPM-type phosphatase domain profile. 38 340 IPR001932 -
Bva13g00363 382 Gene3D - 29 346 IPR036457 -
Bva13g00363 382 Pfam Protein phosphatase 2C 60 309 IPR001932 -
Bva13g00363 382 ProSitePatterns PPM-type phosphatase domain signature. 64 72 IPR000222 GO:0043169
Bva13g00363 382 SMART PP2C_4 32 338 IPR001932 -
Bva13g00363 382 CDD PP2Cc 51 340 IPR001932 -
Bva13g00363 382 SUPERFAMILY PP2C-like 47 342 IPR036457 -
Bva13g00363 382 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 5 377 - -
Bva13g00363 382 PANTHER ALPHABET, ISOFORM E-RELATED 5 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00363 Bva-Chr13 1701511 1703861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00363 25 343 PP2C-type Phosphatase Gene Family AT5G06750 60.938 1.29e-139 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00363 - K01102 gmx:100812137 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00363 13 1701511 1703861 Bva13g00363 13 1701511 1703861 ECH
Bva13g00363 13 1701511 1703861 Bva14g00451 14 2193250 2195465 ECH