Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00356 ATGATCTTCCAGGGAGATGAAAATACTGCTATAACAGCCAAGGAACAAGGCCAAATAGGTGATGAAGTGATTACCAAATCAGACAAGAACATCGAAGGGAGTGAACAAGACAATTCAGCAGAGTGGTTGAACCTCAGCTTAGGAGCTACATCACTCTCAACGGCAGCTGACCCTGAATCACAATCAAGAACAGCTGCTATAAAGGTATTTTCATGCAACTTCTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGAGGTCATCAGAACGCACACAAAAGGGAAAGAGGTGCTGCAAGAAGATACCAGTCTCAAAGGATCATGGCAATGATGGGCTTGCCCATGAATAGTCCTATGCTTCGATCACTTGGTGTCCAGCCCCATTCACTGGTGCACAAGCCATGCAGAGGTGGAACTAGTATGCTGGCAAGCTTTCATGATGCATATGCAGGCCTTGGAATGGCATGGACACCTTTCATTCCGGAGGACCAAACCGATCTGGTGTGGCCAGGAAGCTTTCGTTTGAATCCACAACCTGAGCAACCACAAGATCCATGCAAGCTTGATTTAGACCTCAGGCTCTG 584 0.4658 MIFQGDENTAITAKEQGQIGDEVITKSDKNIEGSEQDNSAEWLNLSLGATSLSTAADPESQSRTAAIKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRIMAMMGLPMNSPMLRSLGVQPHSLVHKPCRGGTSMLASFHDAYAGLGMAWTPFIPEDQTDLVWPGSFRLNPQPEQPQDPCKLDLDLRL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00356 194 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 194 - -
Bva13g00356 194 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 194 - -
Bva13g00356 194 Gene3D Classic Zinc Finger 51 112 - -
Bva13g00356 194 SUPERFAMILY beta-beta-alpha zinc fingers 68 96 IPR036236 -
Bva13g00356 194 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Bva13g00356 194 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00356 Bva-Chr13 1661766 1662862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00356 57 174 C2H2 Transcription Factor Family AT1G24625 42.149 3.89e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00356 - - ahf:112779836 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00356 13 1661766 1662862 Bva13g00356 13 1661766 1662862 ECH
Bva13g00356 13 1661766 1662862 Bva14g00437 14 2129871 2132130 ECH