Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00351 ATGGAGGAGAACGACGAATTTGAAGGGGACCATCTGAGCACAACCACTAGTTTCTCTCAGTTGCTGTTTGCAGATGATGCTGTTGATCTCGATGTGGACCAGACCCTTCGTCATTCCCCTATTTTCTCCCTTGACAAACCACCCAGAATGCTCTGTTTTGGGAACCATCAAAACGAGGGAGACTCTTTGCTTTCTGAAATCACTGGAACTCCGAAGAAATCTGTGCTCACTTCCCCTGAATCTTCCTCTCCTTCTTCCTGCAACCACAGCAGCAGCCACTTCAGTTCCCTGTCCAAGTCTAATAAAAAACGAAATGTTTCGGGACAAGAACTGGTGCGATGCACGGACTCAATCAGCACTAAGACGACGACGACGGCGGCAAGCAAAAAATCCCGTAAAATGAACAAAACTGAAAATCCCACTTCAACCGGACATGCAAAGAAAAATCCGAGAAAAGAGAAGCTTGGGGAACGAATTGCAGCACTACAGCAGCTTGTTTCCCCCTTTGGCAAGACGGATACAGCCTCAGTTCTTCACGAGGCCATGGGCTACATAAGATTTCTCCATGATCAAGTTCAGGTTCTGTGCTCTCCTTACCTGCTGCAACGCCTTCCTTCTTCACCCCACCGCCCTCACCACCAACCAGGGGAAGAAGCAAAGACGGACTTGAAGAGCATGGGGCTGTGTTTAATCCCTGTGGAATGCACCGTACACGTGGCCAACAGCAACGGTGCTGATTTCTGGTCACCGGCTATGGTAGATGAGAAGAACAATAATAATGTTTCTTCATCCAAAAAGCAGTA 803 0.4807 MEENDEFEGDHLSTTTSFSQLLFADDAVDLDVDQTLRHSPIFSLDKPPRMLCFGNHQNEGDSLLSEITGTPKKSVLTSPESSSPSSCNHSSSHFSSLSKSNKKRNVSGQELVRCTDSISTKTTTTAASKKSRKMNKTENPTSTGHAKKNPRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLLQRLPSSPHRPHHQPGEEAKTDLKSMGLCLIPVECTVHVANSNGADFWSPAMVDEKNNNNVSSSKKQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00351 267 MobiDBLite consensus disorder prediction 71 153 - -
Bva13g00351 267 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 204 IPR036638 GO:0046983
Bva13g00351 267 CDD bHLH_AtbHLH_like 151 195 IPR045239 -
Bva13g00351 267 Gene3D - 147 204 IPR036638 GO:0046983
Bva13g00351 267 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 46 244 - -
Bva13g00351 267 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 46 244 - -
Bva13g00351 267 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Bva13g00351 267 MobiDBLite consensus disorder prediction 71 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00351 Bva-Chr13 1641879 1643852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00351 151 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 57.426 4.36e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00351 - - gmx:100809317 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00351 13 1641879 1643852 Bva13g00351 13 1641879 1643852 ECH