Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00343 ATGGATAGCCCTGGGGCCGAAAGAACAACGGTGGGATGGGCGGCGAGAGACCCATCTGGGATTCTATCCCCATACACATACAGATACACGCTAAGAAACATGGGCCCAGAAGATGTGTACATCGAAGTTCAGTACTGTGGTATTTGCCATACTGATCTCCATCAAATCAAAAATGATATGGGAAAGTCCAATTACCCCATTGTTCCTGGGCATGAAGTGGTTGGTCAAGTACTCGAGCTGGGTTCAAATGTGACCAAACACGAAGTAGGAGACGTGGTCGGAGTGGGGCTCCTCGTTGGGTGCTGCAGAAATTGCAGTGCTTGCCAATCTGATATCGAGCAGTATTGCAGCAAGAAAATCTGGTCCTACAACGATGTCTACTCTGATGGTAGACCCACTCAAGGCGGCTTTGCCAAAACTATGGTCGTCGACCAAAAGTTTGTGGTGAAGATACCAGAGGGTTTGCAACCAGATCAAGTTGCACCACTTCTGTGCGCCGGCGTGACCGTGTACAGTCCACTGTTTCACTTTGGATTGAGACAGAGTGAGCTAAGAGGGGGAATTTTGGGGCTTGGAGGAGTGGGGCATATGGGAGTGAAGATAGCCAAGGCAATGGGTCACCATGTGACAGTGATAAGCTCTTCTGATAAGAAGAAACAGGAAGCTCTTGAGCACCTTGGAGCTGACCAGTATCTGATTAGTTCAGATGCTACTCAGATGCAGGAGGCTGCCGATTCACTTGACTATATCATTGATACTGTGCCTGTGGATCACCCTCTTGAGCCTTATCTTTCTTTGCTGAAGCTTGAAGGGAAGCTGATCTTGATAGGTGCCATTAGTACCCCTCTGCAATTCATTAGCTCCATGGTTTTCCTTGGAAGAAAGTCAATTACGGGAAGTCTCACAGGGAGCATGAAGGAGACTGAAGAGATGCTTGAGTTCTGGAAAGAGAAGGGTCTGAGTTCTATGATTGAAATCGTGAAGATGGATTACATTAACAAAGCTTTTGAAAGATTGGAGAAGAATGATGTCAGATACAGGTTCGTTGTGGATGTCGCCGGAAGCAAACTTGATCAATG 1079 0.4708 MDSPGAERTTVGWAARDPSGILSPYTYRYTLRNMGPEDVYIEVQYCGICHTDLHQIKNDMGKSNYPIVPGHEVVGQVLELGSNVTKHEVGDVVGVGLLVGCCRNCSACQSDIEQYCSKKIWSYNDVYSDGRPTQGGFAKTMVVDQKFVVKIPEGLQPDQVAPLLCAGVTVYSPLFHFGLRQSELRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKQEALEHLGADQYLISSDATQMQEAADSLDYIIDTVPVDHPLEPYLSLLKLEGKLILIGAISTPLQFISSMVFLGRKSITGSLTGSMKETEEMLEFWKEKGLSSMIEIVKMDYINKAFERLEKNDVRYRFVVDVAGSKLDQ 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00343 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Bva13g00343 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 359 - -
Bva13g00343 359 Pfam Zinc-binding dehydrogenase 193 314 IPR013149 -
Bva13g00343 359 Gene3D - 166 322 - -
Bva13g00343 359 SMART PKS_ER_names_mod 20 350 IPR020843 GO:0016491
Bva13g00343 359 CDD CAD1 11 351 - -
Bva13g00343 359 SUPERFAMILY GroES-like 29 180 IPR011032 -
Bva13g00343 359 PANTHER ALDEHYDE REDUCTASE 4 359 - -
Bva13g00343 359 Gene3D - 13 352 - -
Bva13g00343 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 320 IPR036291 -
Bva13g00343 359 Pfam Alcohol dehydrogenase GroES-like domain 37 151 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00343 Bva-Chr13 1605648 1607597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00343 5 357 Monolignol Biosynthesis Gene Families AT3G19450 73.654 5.58e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00343 K00083 - gmx:100777558 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00343 13 1605648 1607597 Bva13g00343 13 1605648 1607597 ECH