Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00341 ATGGGAAGCCTTGAGACGGAAAGAACAACGGTGGGATGGGCGGCGAGAGACCCATCTGGGATTCTCTCCCCGTACACATACACGCTAAGAAACAATGGCCCAGAAGATGTTTACATCAAAGTTCAGTACTGTGGAATTTGCCATTCTGATCtccatcaaattaaaaatgaccTGGGCATGTCCAATTACCCCATGGTTCCTGGGCATGAAGTGGTTGGCCAAGTACTCGAGGTGGGCTCAAATGTAACCAAATTCAAAGTAGGAGAAGTGGTCGGAGCGGGACTCCTCGTTGGGTGCTGCAGAAATTGCAGTGCTTGCCAATCTGATATCGAGCAGTACTGCAGCAAGAAAATCTGGTCTTACAACGATGTCTACACTGATGGTATACCCACCCAAGGTGGCTTTGCCGAAACCATGGTCGTCGATCAAAAATTTGTCGTGAAGATACCAGAGGGTTTGGAACCAGTGCAAGTTGCACCACTTCTGTGCGCCGGCGTGACCGTGTACAGTCCACTGTCACACTTTGGATTGAAACAGAGTGGGCTGAGAGGGGGAATTTTGGGGCTTGGAGGAGTGGGGCATATGGGAGTGAAGATAGCCAAGGCAATGGGTCACCATGTGACAGTGATAAGCTCTTctgataagaagaaaaaggaagctcTTGAGCACCTTGGAGCTGATCGGTATCTGGTTAGCTCGGATGCTACTCAGATGCAAGAAGCTGCTGATTCACTTGACTATATCATTGATACTGTGCCTGTGGGCCACCCTCTTGAGCCTTATCTTTCTTTGCTGAAGCTTGACGGGAAGCTGATCTTGATGGGCGTCATTAGTACCCCTCTGCAATTCGTTAGCCCAATGGTCATGCTTGGAAGAAAGTCAATTACAGGAAGTTTCATAGGGAGCATGAAGGAGATTGAGGAGATGCTTGAGTTCTGGAAAGAGAAGGGTCTGAGTTCTATGATTGAAATCGTGAAGATGGATTACATTAACAAAGCTATTGAAAGATTGGAGAAGAACGATGTCAGATACAGGTA 1037 0.459 MGSLETERTTVGWAARDPSGILSPYTYTLRNNGPEDVYIKVQYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGQVLEVGSNVTKFKVGEVVGAGLLVGCCRNCSACQSDIEQYCSKKIWSYNDVYTDGIPTQGGFAETMVVDQKFVVKIPEGLEPVQVAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKKEALEHLGADRYLVSSDATQMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVISTPLQFVSPMVMLGRKSITGSFIGSMKEIEEMLEFWKEKGLSSMIEIVKMDYINKAIERLEKNDVRYR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00341 345 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Bva13g00341 345 Gene3D - 13 345 - -
Bva13g00341 345 SMART PKS_ER_names_mod 20 334 IPR020843 GO:0016491
Bva13g00341 345 CDD CAD1 11 345 - -
Bva13g00341 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
Bva13g00341 345 SUPERFAMILY GroES-like 16 181 IPR011032 -
Bva13g00341 345 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Bva13g00341 345 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Bva13g00341 345 PANTHER ALDEHYDE REDUCTASE 4 345 - -
Bva13g00341 345 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 345 - -
Bva13g00341 345 Gene3D - 164 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00341 Bva-Chr13 1596636 1599159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00341 1 345 Monolignol Biosynthesis Gene Families AT3G19450 77.168 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00341 K00083 - gmx:100777558 606.675