Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00339 ATGAATCAAGATTCCGCAATGGAGGCGCTGCAGAAGGATTTGGATCGGGTCAAGGGTCCATGGAGCCCAGACGAGGACGAGTTATTGAAGAAGCTTGTGCAACGGCACGGCCCTCGGAATTGGTCGATTATCAGCAAATCGATTCCTGGTCGGTCGGGGAAGTCCTGCCGCCTGCGGTGGTGTAATCAGTTGTCACCAGATGTGGAACACCGGCCGTTCACTCCGGAGGAGGACGAGGCCGTCATAAAGGCCCACGCAAAGTACGGTAACAAGTGGGCCACCATAGCCCGGCTCCTCAACGGTCGTACGGATAACGCTATTAAGAACCATTGGAACTCCACTTTAAAGCGCAAGTACTCGTCCTTGATCGGCGATGAGGCTGGAGCTGACGAGGCCCCGCTTCAGCCGGGGAAAAAGCCAGCCACCGGCGATCGTGCTCCACTTATGACTTCGATCTCAGCGGGACATTGTTACAGCCCCAGCAGCCCATCTGGATCGGATGTGAGTGATTCAGGTGTCCCTGTTGCGTCTTCCTCGCAGGCGATTCGCCCTGCAGTTGTGATAAATGGCGCTGTCCTGCCGCCTTCCCAGCAGGTGGAGTCACGCCCGAGTCCTTTTAGCAACAGCGAGCCTTCAACTGAACTCTCTTTGTGTCTTCCTGGAACCTACGCGTTCGACTTACCAATGCGACAAAACTTGAGCTCCTCTGCAGAGCAGCGTGCATTATCTGCACCAGCGCCAGTGCTGCCTGAGAAAGAGTCGCCAATGATGACATTTGGGCCCCAATTACTCTCTGTGATGAAGGAGATGATCAGAGATGAGGTCAGAAATTACATGACGGGATTGGAGGAGAGGTTGAGCTCGAATACTTG 872 0.547 MNQDSAMEALQKDLDRVKGPWSPDEDELLKKLVQRHGPRNWSIISKSIPGRSGKSCRLRWCNQLSPDVEHRPFTPEEDEAVIKAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYSSLIGDEAGADEAPLQPGKKPATGDRAPLMTSISAGHCYSPSSPSGSDVSDSGVPVASSSQAIRPAVVINGAVLPPSQQVESRPSPFSNSEPSTELSLCLPGTYAFDLPMRQNLSSSAEQRALSAPAPVLPEKESPMMTFGPQLLSVMKEMIRDEVRNYMTGLEERLSSNT 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00339 290 SMART sant 69 117 IPR001005 -
Bva13g00339 290 SMART sant 17 66 IPR001005 -
Bva13g00339 290 MobiDBLite consensus disorder prediction 154 176 - -
Bva13g00339 290 MobiDBLite consensus disorder prediction 194 213 - -
Bva13g00339 290 MobiDBLite consensus disorder prediction 128 176 - -
Bva13g00339 290 Pfam Myb-like DNA-binding domain 72 114 IPR001005 -
Bva13g00339 290 Pfam Myb-like DNA-binding domain 18 64 IPR001005 -
Bva13g00339 290 CDD SANT 72 115 IPR001005 -
Bva13g00339 290 Gene3D - 72 118 - -
Bva13g00339 290 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
Bva13g00339 290 Gene3D - 17 69 - -
Bva13g00339 290 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Bva13g00339 290 PANTHER MYB PROTEIN-RELATED 12 275 - -
Bva13g00339 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 119 IPR017930 -
Bva13g00339 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 68 IPR017930 -
Bva13g00339 290 MobiDBLite consensus disorder prediction 1 22 - -
Bva13g00339 290 ProSiteProfiles Myb-like domain profile. 13 64 IPR001005 -
Bva13g00339 290 CDD SANT 20 62 IPR001005 -
Bva13g00339 290 PANTHER TRANSCRIPTION FACTOR MYB73 12 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00339 Bva-Chr13 1589459 1590844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00339 11 283 MYB Transcription Factor Family AT4G37260 48.475 1.97e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g00339 Myb_DNA-binding 3.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00339 K09422 - mnt:21409653 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00339 13 1589459 1590844 Bva13g00339 13 1589459 1590844 ECH
Bva13g00339 13 1589459 1590844 Bva14g00418 14 2050457 2051701 ECH