Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00335 ATGAGCTTTAACTCCATGCATCTCCATTTTTGGTGGCGTGTTTCTGtgtttattcttcttctacttCGATCTTTTGCTCTCAACTCTGATGGGGTTCTCTTGCTTTCCTTCAAATACTCCATCCTCAAAGACCCATTATCAGTTTTAGAAAGCTGGAACTACGACGATGCAACTCCTTGTTCATGGAATGGGGTTACCTGCACAGAAATTGGAAATGCTGGTACCCCTGACATGTTTAGGGTGACGAGCTTGGTTCTTCCCAATAGCCAGCTTCTGGGTTCGATCACAAAAGACCTTGGTATGATCCAACATCTTCGCCATCTTGATCTCTCCAACAATTTCCTAAACGGGTCTTTACCCATTTCTATCTTCAATGCTTCTGAACTTCAAGTACTTTCTCTCGGAAGCAATGCCATCTCCTGTAAGCTACCTGAATTTGTTGGTCAATTGAGAAGTCTTCAACTTCTGAACCTTTCTGGTAATGCTTTGGCTGGATCGGTCCCTGAAACTCTCACTGATTTGAAGAATTTAACAGTGGTTTCTTTAAggagtaataatttttctggCAAAGTTCCAAGTGGGTTCAACTCTGTTGAAGTTTTAGATCTATCTTCGAATTCGCTTAATGGGTCTTTGCCGAATGATTTTGGTGGCGAGAGCTTGCGCTACTTGAATCTCTCTTATAATAAGATTTCGGGAACAATTCCATCAGAATTTGCCAAAGTGATTCCAGTTAATTCTTCAGTTGATCTCTCATTCAATAACCTAACAGGGGAAATACCGCAGTATCTGGCTTTGCTCAAccaaaaaactcaatttttatcTGGGAATGCTGATCTCTGTGGGAAGCCTTTGAAGCTTCTCTGTCCTGTTCCTTCTACTCTATCTACTCCACCCAATGTCTCAAGTACAGCGCCAGCAATTGCAGCCATACCCAAAAACATTGACACAAACCCCACAACAAACACAACAGGTACAGGTAGTAGTAATGGGAATCAGAATCAGAATGGGTCACCCAGTGGCCTGAAGCCAGCCACAATAGTTGGCATCGTTGTTGGAGACTTGGCTGGAATTGGCTTTCTCGCTATGATCATTCTTCTTGTTTACcaacagagaaagagaagagatgtGAAGCCTAGCGCTAATCCTGCCAACTCCGGGAAGAAACTGGAAACTGTGACAAAACAAGACCCAGATGTGAGAACGCCCACACTTCCCTGTTCTTGCTTGACAATCAAAGAAGAGACTTCAGAAGCAACTAGCTCAGACAGTGACCATGAGAATGCGAAAATTGACATGGCCCAAAGCGGGAATCTTGAGAAAGAAGGTGGTACTCTTATAACAGTGGATGGAGAAACAAAGCTCGAGCTAGAGACTTTGCTTAAGGCATCGGCATACATTTTGGGAACAAGCGCTGCAAGCATAGTGTACAAGGCAGTGCTTGAAGATGGAAGAGCATTTGCTGTTAGAAGAATTGGAAAGTGTGGAATTGAAAGGATGAAGGACTTTGAGACCCAAGTGAGGGCCATTGCTAAGCTTCGTAACCCCAATTTGGTTAGGATTCGTGGGTTCTACTGGGGAGATGATGAGAAGCTTTTAATCTGTGACTATGTACCCAATGCCAGCCTCTCTAGCATCAATATCAGAAGAACAGGGTCATCTCCTTTTAAATTGCCCATGGAGGTTCGGTTCAAGATAGCAAAAGGGGTTGCAAGAGGCTTAGCATTCATTCATGAGAAGAAACACGTGCATGGCAGCATTAAACCCAGCAACATCCTATTAAACTCTGAAATGGAACCCATAATCAGCGATTTTGGGCTAGACCGGCTCCTCTCATCCAACATGAACCAGAGAGGAAGTGGTTCAGCTCGGAATTTGGCACCCCAAAGAAACCAACAAGACCTCCCAATCGGTGCGAGCCCTTACGTACCAATGGGTTCAACAAATGGGACCCAATTAAGCTATCAAGCACCAGAGTCACTGCAAAACATTAAGCCTAGCCCCAAGTGGGACGTTTACTCATACGGTATCCTGTTGCTGGAGCTTCTGACAGGGCGAGTGTTCTCTGACCGAGAATTGGACCAGTGGCCTGCAATGGAGTCAGAGGAGGAGAAAAACCGGGTTCTGAGGATGGTTGACGTGGAAGGCAAAGAAGATGTCACATTGGCATGGTTCAAGTTAGGGTTGAGTTGTGCAAGTGTTGTCCCACAAAAGAGACCATCCATGAAAGAAGCACTACACATCTTAGAGAAAATCAATCCTGTCATCAATTCTTCACATTA 2282 0.4312 MSFNSMHLHFWWRVSVFILLLLRSFALNSDGVLLLSFKYSILKDPLSVLESWNYDDATPCSWNGVTCTEIGNAGTPDMFRVTSLVLPNSQLLGSITKDLGMIQHLRHLDLSNNFLNGSLPISIFNASELQVLSLGSNAISCKLPEFVGQLRSLQLLNLSGNALAGSVPETLTDLKNLTVVSLRSNNFSGKVPSGFNSVEVLDLSSNSLNGSLPNDFGGESLRYLNLSYNKISGTIPSEFAKVIPVNSSVDLSFNNLTGEIPQYLALLNQKTQFLSGNADLCGKPLKLLCPVPSTLSTPPNVSSTAPAIAAIPKNIDTNPTTNTTGTGSSNGNQNQNGSPSGLKPATIVGIVVGDLAGIGFLAMIILLVYQQRKRRDVKPSANPANSGKKLETVTKQDPDVRTPTLPCSCLTIKEETSEATSSDSDHENAKIDMAQSGNLEKEGGTLITVDGETKLELETLLKASAYILGTSAASIVYKAVLEDGRAFAVRRIGKCGIERMKDFETQVRAIAKLRNPNLVRIRGFYWGDDEKLLICDYVPNASLSSINIRRTGSSPFKLPMEVRFKIAKGVARGLAFIHEKKHVHGSIKPSNILLNSEMEPIISDFGLDRLLSSNMNQRGSGSARNLAPQRNQQDLPIGASPYVPMGSTNGTQLSYQAPESLQNIKPSPKWDVYSYGILLLELLTGRVFSDRELDQWPAMESEEEKNRVLRMVDVEGKEDVTLAWFKLGLSCASVVPQKRPSMKEALHILEKINPVINSSH 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00335 760 MobiDBLite consensus disorder prediction 375 399 - -
Bva13g00335 760 Pfam Protein kinase domain 468 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00335 760 SUPERFAMILY Protein kinase-like (PK-like) 467 753 IPR011009 -
Bva13g00335 760 Gene3D Phosphorylase Kinase; domain 1 432 537 - -
Bva13g00335 760 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515
Bva13g00335 760 Gene3D Ribonuclease Inhibitor 27 195 IPR032675 -
Bva13g00335 760 PANTHER OS04G0122200 PROTEIN 22 753 - -
Bva13g00335 760 MobiDBLite consensus disorder prediction 311 340 - -
Bva13g00335 760 SUPERFAMILY L domain-like 28 286 - -
Bva13g00335 760 ProSiteProfiles Protein kinase domain profile. 462 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00335 760 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Bva13g00335 760 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 22 753 - -
Bva13g00335 760 Gene3D Transferase(Phosphotransferase) domain 1 539 758 - -
Bva13g00335 760 MobiDBLite consensus disorder prediction 314 340 - -
Bva13g00335 760 Gene3D Ribonuclease Inhibitor 196 291 IPR032675 -
Bva13g00335 760 PRINTS Leucine-rich repeat signature 105 118 - -
Bva13g00335 760 PRINTS Leucine-rich repeat signature 150 163 - -
Bva13g00335 760 MobiDBLite consensus disorder prediction 385 399 - -
Bva13g00335 760 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Bva13g00335 760 Pfam Leucine rich repeat 176 231 IPR001611 GO:0005515
Bva13g00335 760 SMART LRR_typ_2 219 241 IPR003591 -
Bva13g00335 760 SMART LRR_typ_2 150 173 IPR003591 -
Bva13g00335 760 SMART LRR_typ_2 102 126 IPR003591 -
Bva13g00335 760 SMART LRR_typ_2 195 218 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00335 Bva-Chr13 1571827 1575019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00335 26 752 Receptor kinase-like Gene Family AT2G15300 52.431 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva13g00335 Pkinase 1.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00335 - - gmx:100820334 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00335 13 1571827 1575019 Bva13g00335 13 1571827 1575019 ECH
Bva13g00335 13 1571827 1575019 Bva14g00414 14 2032891 2035807 ECH