Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00332 ATGGCTACGTTTTCAATGGGGACTCCCTTGTGCCCGTCTCAACCGTTGCGGAACCGTGAACTTCACTCTTCATTTCATCGCCTTCGCACTGTAGAATCTTCATTATCATCCTTGCCTTTCTTTGGTTCGTCATGTAGAATTAGAGGTGCCAGGTTACTTGGCAATAATGTATTGGCACGGGCAGAGGATAAGGCCAGAGGTTCTTCGTTTCAGCCGCAACAAGCTCAATCAAATTCGGAGAAACAGTTCCAGGACTTGGGGCCAGAGTCTGGATCTTGCTATCCCATATGTTCAATTGATGAAACAAGCTCACAAGATTTTGAAGACACTTACAAGCCCAAGACTGATTTTCTGAAAGCTCTTGCAATATTTGCAGCAGCTGGAACTGGAGCAGTGGCAATTAATCATTCTTGGGTAGCAGCTAATCAGGATATTGCTATGGCAATTTTATTTGGAATAGGATATGCCGGCATCGTCTTTGAAGAATCTCTAGCCTTCAATAAAAGTGGAGTTGGACTATTGATGGCTGTAAGCCTTTGGGTAATACGGAGTGTTGGGGCTCCTTCAACTGATGTAGCTGTATCAGAGTTAACACATGCATCTGCAGAAGTCAGTgaaatagtatttttcttgCTCGGTGCAATGACCATTGTTGAAATAATTGATGCTCATCAAGGATTTAAGCTGGTTACTGACAATATAACAACTCGAAAGCCGCGCCTTCTTCTCTGGGTGATTGGTATCGTGACTTTTTTCCTCAGTTCAATTCTGGACAACCTGACATCTACAATTGTCATGGTTTCCCTGTTGCGGAAACTAGTTCCTCCATCAGAGTACCGGAAGATTCTAGGAGCTGTTGTTGTAATAGCCGCAAATGCTGGTGGTGCATGGACTCCAATTGGTGATGTTACCACTACCATGTTGTGGATTCATGGTCAAATATCCACATTGCAGACGATGAAGGGTTTGTTTATACCTTCAGCCATCTCTCTAGCTGTTCCTCTCGCTCTCATGTCCCTGACTAGTGAAGTCAATGGCAAGGGACAGGATTCTCCAAATGTCTTGGCATCTGAACAGATGGCTCCTCGTGGACAGCTTGTTTTTGCTGTGGGTATAGCAGCTTTACTTTTTGTTCCGGTGTTCAAGGCCCTTACAGGCTTACCTCCTTACATGGGGATGCTGCTTGGACTGGGAGTACTTTGGCTTCTCACTGATGCCATTCATTATGGTGAATCTGAAAAGCAGAGGTTAAAAGTTCCTCAGGCTTTATCAAGGATAGACACTCAGGGAGCATTATTCTTCCttggaattttattatctgtTAGCAGTCTGGAGGCCGCAGGGATTCTTCGGGAGTTAGCAAATTACCTTGATGCTCATATTCCAAATATTGAGCTTATTGCGAGTACCATAGGAGTTCTATCAGCAATTATAGACAATGTTCCTCTGGTTGCGGCAACAATGGGAATGTATGATCTCTCCTCTTTTCCTCAGGATTCAGAGTTTTGGCAGTTGATTGCATATTGTGCGGGTACTGGTGGATCCATGTTAATTATTGGCTCTGCTGCTGGAGTTGCTTTCATGGGGATGGAAAAAGTTGACTTCTTTTGGTATTTACGGAAGATTAGTGGCTTTGCTTTTGCTGGGTATGCGGCTGGTATTGCTGCCTATTTGGCAGTAAATAACCTTCACATTTCCCTGCCCACAACTCTCTCTGAGGTTCCGTTTCTCTCTGGTTCTTG 1742 0.4369 MATFSMGTPLCPSQPLRNRELHSSFHRLRTVESSLSSLPFFGSSCRIRGARLLGNNVLARAEDKARGSSFQPQQAQSNSEKQFQDLGPESGSCYPICSIDETSSQDFEDTYKPKTDFLKALAIFAAAGTGAVAINHSWVAANQDIAMAILFGIGYAGIVFEESLAFNKSGVGLLMAVSLWVIRSVGAPSTDVAVSELTHASAEVSEIVFFLLGAMTIVEIIDAHQGFKLVTDNITTRKPRLLLWVIGIVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLQTMKGLFIPSAISLAVPLALMSLTSEVNGKGQDSPNVLASEQMAPRGQLVFAVGIAALLFVPVFKALTGLPPYMGMLLGLGVLWLLTDAIHYGESEKQRLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDAHIPNIELIASTIGVLSAIIDNVPLVAATMGMYDLSSFPQDSEFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKISGFAFAGYAAGIAAYLAVNNLHISLPTTLSEVPFLSGS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00332 580 Pfam Citrate transporter 157 511 IPR004680 GO:0016021|GO:0055085
Bva13g00332 580 MobiDBLite consensus disorder prediction 64 87 - -
Bva13g00332 580 PANTHER BNAC03G40960D PROTEIN 1 580 - -
Bva13g00332 580 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 580 IPR045016 GO:0006814|GO:0015297
Bva13g00332 580 MobiDBLite consensus disorder prediction 67 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00332 Bva-Chr13 1558980 1563791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00332 1 580 Antiporters AT3G19490 75.862 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00332 - - pop:7457553 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00332 13 1558980 1563791 Bva13g00332 13 1558980 1563791 ECH