Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00321 ATGAGCACCAATTCCATCTCTTTCTGTATCACATTACTGTTATCTGCTTTGTTGCTAATTCACTCAAATTTGAACCATGGAGTGGGTTTTGCATTTGCTCAAGAGATAGCTCACTCAGAGAGGGAAGCATTGGAAATTATCATAGGAGGTGGAGGTGGTGGGGGTTCTTATGCCCCTGCCCCCTCCCCTGAAGCTGAATGTCCCCCTCCCCCTCCCCCTCCTGAACCTGAATGTCCCCCTCCATCATCACCACCTCCTCCTCCGCCGCCaccacctcctcctcctccaccaccacctcctCCTCCGCCGCCACCACCACCTCCTCCTCCGCCACCGCCACCACCTCCTCCGCCACCCCCGccgccaccaccaccacccccGCCACCGTTAATAGATACCAGACCCTTCCTTGAGCATGCGAGAGATACTCttctaaaattcaaaacgACCATTGAACCCAATGAGTTTACGAAAAGCTGGAAGAAGGGTGGTAATGTTTGTAGTTATAGAGGAGTCCGATGTGACAAGTTTCCAAAAGGAAATGGGAATGCCACTTCGGGATTAGACTTCAATGGAGCTGGGTTCACAGGCAAAAGCGGTGCTCAATTGAAGCTCAAAGGTATCTTGGACGAGATACCACAGCTGACATTTTACCATGTAAACTCAAACAATTTCTGCGACATGGTCCCAACCAAAATTACCAAGTTTAAGTACTTCTTCGAGCTAGACCTTAGCAACAACAAAATCGTCGGTGAGTTCCCACAGGCAGCGATCGATGCCAAGGAACTACTCTTCTTAGATCTCAGGTTCAACAATTACTACGGGACAGTTCCACCAGAACTGTTCAAGAAGGATCTCGATGTCATTTTcatcaacaacaataaattcaGTGGACGTCTTCCTGACAATTTTGGTTCGACACCAGCCAGGTATCTTACTTTTGCCGACAACTACTTCACTGGTGAAATCCCAAGTAGCATTGGCCAAGCTTATAAGACCCTCACAGAGGTTCTGTTCTTGGGCAACCAGTTTTATGGGTGCTTGCCGCCTGAGATTGGGAAACTAGCAAAGATGACAGTTTTTGATGTGAGCAAAAACCAATTGAGGGGTCCAATTCCAAACTCCTTTGTTTGTTTGAAGAGCATTCAGTACCTCAAGTTGGCCAATAACCAATTTTCTGAAGCTGTGCCGGAGATGCTCTGCAAGCTTCCCGGACTCAAAAACGCCGGTGTTCTGGACTTACGAAACAACTACTTCACCGAAGTTGGACCTGAATGCAAAAAGCTCATTGGAGTGCTTAACGTGGACAACAATTGCATTAAGGGCGAACCACGTCAGAAGTCAGAGGCAGCATGCGACAAGTTCTTCAAGAGCAAAATTCCCTGCAAAAATGCCAAGTATTTGTATACTTACATCCCTTGTAAAATTGATTCTTCGATCACCAAACAGACTGCTGATCTACCACTGGCCGGTGCTCCCCCTGCGCCGGTCACGTACAAGTCTCTCAAACCGCATCGACTCTG 1523 0.4517 MSTNSISFCITLLLSALLLIHSNLNHGVGFAFAQEIAHSEREALEIIIGGGGGGGSYAPAPSPEAECPPPPPPPEPECPPPSSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLIDTRPFLEHARDTLLKFKTTIEPNEFTKSWKKGGNVCSYRGVRCDKFPKGNGNATSGLDFNGAGFTGKSGAQLKLKGILDEIPQLTFYHVNSNNFCDMVPTKITKFKYFFELDLSNNKIVGEFPQAAIDAKELLFLDLRFNNYYGTVPPELFKKDLDVIFINNNKFSGRLPDNFGSTPARYLTFADNYFTGEIPSSIGQAYKTLTEVLFLGNQFYGCLPPEIGKLAKMTVFDVSKNQLRGPIPNSFVCLKSIQYLKLANNQFSEAVPEMLCKLPGLKNAGVLDLRNNYFTEVGPECKKLIGVLNVDNNCIKGEPRQKSEAACDKFFKSKIPCKNAKYLYTYIPCKIDSSITKQTADLPLAGAPPAPVTYKSLKPHRL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00321 507 MobiDBLite consensus disorder prediction 62 94 - -
Bva13g00321 507 PRINTS Proline rich extensin signature 53 65 - -
Bva13g00321 507 PRINTS Proline rich extensin signature 101 122 - -
Bva13g00321 507 PRINTS Proline rich extensin signature 69 85 - -
Bva13g00321 507 PRINTS Proline rich extensin signature 89 101 - -
Bva13g00321 507 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 485 - -
Bva13g00321 507 SUPERFAMILY L domain-like 185 430 - -
Bva13g00321 507 SUPERFAMILY Formin homology 2 domain (FH2 domain) 119 128 - -
Bva13g00321 507 PANTHER BNAC05G26270D PROTEIN 24 485 - -
Bva13g00321 507 MobiDBLite consensus disorder prediction 47 94 - -
Bva13g00321 507 Gene3D Ribonuclease Inhibitor 334 470 IPR032675 -
Bva13g00321 507 Gene3D Ribonuclease Inhibitor 137 333 IPR032675 -
Bva13g00321 507 Pfam Leucine rich repeat N-terminal domain 139 175 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00321 Bva-Chr13 1507690 1509438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00321 128 456 Leucine-rich Repeat extension Gene Families AT3G24480 40.964 5.08e-73 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00321 - - gmx:100781083 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00321 13 1507690 1509438 Bva13g00321 13 1507690 1509438 ECH