Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00310 ATGGCACAGGCGCAAGCGCAGGCGCAAGGGATTGAATCGGTTCAGTGCTTTGGTCGCAAGAAAACTGCTGTGGCGGTGACTTACTGTAAAAAGGGTCGTGGATTGATCAAGATCAATGGCTGCCCGATCGAACTTGTGGAGCCAGAAATTCTGCGATTCAAGGCATTCGAGCCCATCCTTCTGTTGGGGAGGCACCGTTTCAACGGAGTCGACATGCGTATCCGTGTCAAGGGTGGCGGTCACACCTCACAGATATACGCAATTCGTCAGAGCATAGCCAAAGCCCTTGTCGCTTTCTACCAGAAGTATGTGGACGAGCAGAGCAAGAAGGAGATCAAGGACATCCTCGTCAGGTACGATCGAACCCTACTCGTCGCTGATCCAAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAGTCCTACCGTTG 452 0.5376 MAQAQAQAQGIESVQCFGRKKTAVAVTYCKKGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00310 150 PANTHER RIBOSOMAL PROTEIN S9 3 150 IPR000754 GO:0003735|GO:0005840|GO:0006412
Bva13g00310 150 SUPERFAMILY Ribosomal protein S5 domain 2-like 13 150 IPR020568 -
Bva13g00310 150 Pfam Ribosomal protein S9/S16 18 150 IPR000754 GO:0003735|GO:0005840|GO:0006412
Bva13g00310 150 ProSitePatterns Ribosomal protein S9 signature. 78 96 IPR020574 GO:0003735|GO:0005840|GO:0006412
Bva13g00310 150 PANTHER - 3 150 - -
Bva13g00310 150 Gene3D - 2 150 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00310 Bva-Chr13 1465105 1465841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00310 6 150 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 86.207 2.36e-92 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00310 K02960 - cit:102619145 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00310 13 1465105 1465841 Bva13g00310 13 1465105 1465841 ECH