Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00309 ATGGATGCTGCATCCTTTTTTCAGGCTGAGCTTTTCAGTCTTAAAACGCAGAGCACGAGGTGTCCAGAAAAggcaagagaagaaaagaagcaaatgGCTACTAACACGGAACAACAACAGCAAACAGAAGCCGGAAGGCACCAAGAGGTTGGCCACAAGAGCCTTCTGCAGAGTGATGCTCTGTATCAGTATATACTAGAGACTAGTGTTTACCCAAGAGAGCATGAAGCCATGACAGAGCTCAGAGAGTTAACTGCCAAGCACCCTtgGAACATCATGACAACCTCAGCAGACGAAGGCCAGTTCTTGAACATGCTccttaaaattatcaatgccAAGAATACCATGGAAATCGGTGTCTACACTGGCTACTCCCTGCTTGCCACAGCCCTCGCTCTCCCCGAGGATGGAAAGATCTTGGCCATGGACATTAACAAAGAGAACTATGAACTGGGTTTGCCAGTGATTGAAAAAGCTGGCGTTGCACACAAAATCGATTTCAGAGAAGGCCCAGCTCTCCCTGTTCTCGATGAACTCATTGAAGATGAAAAGAATCATGGCAGCTTCGATTTCATCTTTGTGGATGCTGACAAGGACAATTACCTCAATTACCATAAGAGGCTGATTGAGCTTGTTAAGGTTGGGGGTCTGATCGGCTACGATAACACCCTATGGAACGGTTCTGTGGTGGCACCCCCTGATGCTCCGCTTAGGAAGTATGTCAGGTACTACAGGGATTTCGTCTTGGAACTCAACAAGGCTTTGGCTGTGGACCCCAGGATAGAGATCTGCATGCTTCCGGTTGGTGATGGAATCACTCTCTGCCGCCGGATTAAGTG 839 0.4565 MDAASFFQAELFSLKTQSTRCPEKAREEKKQMATNTEQQQQTEAGRHQEVGHKSLLQSDALYQYILETSVYPREHEAMTELRELTAKHPWNIMTTSADEGQFLNMLLKIINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINKENYELGLPVIEKAGVAHKIDFREGPALPVLDELIEDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00309 279 MobiDBLite consensus disorder prediction 18 50 - -
Bva13g00309 279 CDD AdoMet_MTases 117 218 - -
Bva13g00309 279 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 54 278 IPR002935 GO:0008171
Bva13g00309 279 Gene3D Vaccinia Virus protein VP39 53 279 IPR029063 -
Bva13g00309 279 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 37 279 - -
Bva13g00309 279 Pfam O-methyltransferase 67 278 IPR002935 GO:0008171
Bva13g00309 279 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 58 277 IPR029063 -
Bva13g00309 279 PANTHER O-METHYLTRANSFERASE-RELATED 37 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00309 Bva-Chr13 1462146 1463562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00309 35 278 Monolignol Biosynthesis Gene Families AT4G34050 87.705 1.45e-168 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00309 K00588 - gmx:100779260 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00309 13 1462146 1463562 Bva13g00309 13 1462146 1463562 ECH
Bva13g00309 13 1462146 1463562 Bva14g00388 14 1931821 1933950 ECH