Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00305 ATGGAGTGCGGGCTTGTCTTCTTCGGCTTGTTGGCATTTCTCGGAATGCAGCTTCCTCTAATGATGGCTGGCTGCCCTTTGGATTTTAGTGGTTCAAACTTCACACTGGCATCGTCTATATGCTCTAGCCAAGGTGACAGGGGGAAATGTTGTCGCTACATTAACGCTAACATTGCAGTTTCTGTTGCTCGTTATGCAAATGCAACAAGCAACCTGGGGGTTGCTCCAAATGTTTCTGATGTCTGCCTCCAGACTATATCTGAGACGCTGCAGCTGTATGGAGTTCCACGAAATGCAACTGTTTTTTGTGGTGTTGGGACGAAAATTCCCTTCAATTATGATTGTAAGGGTCGAAATACTGTCACGCAGATGTTGCTGTCTCCCAGATTTATGGATGTCATGGAAAATTGCAAAGCTCCACTTGTAGAGCAAAGCAAATGCAAGAAGTGCTTGAATGCCGGCATTGGTTACCTACACCATGTGATAGGAATTGAAGTAGATAATATCACACTGAGTACATGTCGTGATGCAGCCTTTGCTGCACTGGCCAGCCAAGGCGATGCGAGATCTACTGTTGACATCGCAAGCTGTTTCTTTGGGGTTCAAGGACTTCTTGTGCCTCCTGCTTCAGAGCCATCCCCATCATTGCCAACTACGGAGGCCTCTCCAAGTCCATTGGTTGCTGATGGCCCAAGTCAATTGATGTTAGGTGTGCCCATTAAGGAATCCCACCGTTCATACCACTTGACATTAATTCCAGGCATTGGTATTGCCGTCATAGTTGTGGCTGTTGTGTTGCTCATAGTCTTGATAGTTCTAATAAGTCAGAAAAGCAGAGAGCTAGAGGGGACTGATAATTTAGGTAAAGCCTCTTCAAAAGGCTTACCTCCTTGTGCAACATGGAAATTTCAGGAAGGTCCGTCATCTACATTCCGGAAATTTAACTACAAGGACATAAAAAGGGCAACAGAGAATTTCAGCACCATAATTGGACAAGGAGGATTTGGAACAGTGTACAAAGCTCATTTTGGTGATGGACTGATGGCAGCAGTGAAGCGGATGAACAAAGTGTCCGAGCAGGGGGAGGAAGAGTTCTGCAGAGAAATCGAGCTTCTTGCTCGGCTGCATCATCGGCATCTTGTTTCTCTAAAAGGTTTTTGCATCAAAAAGCATGAGAGGATTCTGATGTACGAGTACATGGATAATGGAAGCTTAAAAGATCATCTTCATTCCCCTGGTAAAACACCTCTAAGTTGGCGAACTAGAATCCAAATTGCCATTGACGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCTTTGTGCCACAGAGACATTAAGTCAAGCAATATTTTACTTGATGAGAATTTTGTCGCAAAGGTAGCTGATTTTGGTCTTGCACTTGCATCAACAAATGGCTCTATCTGCTTTGAACCAGCGAATACTGATATCCGCGGTACTCCagGTTACATGGATCCTGAATATGTGGTTACTCAAGAGCTCGCTGAAAAGAGTGACATATATAGTTTTGGTGTGGTATTATTAGAAATTGTGACGGGAAGAAGAGCAATTCAAGATGATAGGAACTTGGTAGAATGGGCCCAACCTTATATGAAATCAGACACAAGGTTGATGGAGCTAGTGGATCCCAATGTCAGGGAGTCTTTTGACTTGGATCAGCTCCAAACGGTGGTATCCATAGTAGGATGGTGTACACAGAGAGAAGGCAGGGAAAGGCCTTCAATAAAACAGGTTCTTAGGCTTCTGTACGAGACCTCAGAACCCATGAACAGTGAGTTTGCAGAAGCTGTAGAAAACggtgaatatgaaaaaaatcatCTGAGAGGCAGAAGAAGCAAGGGACAAATACACAGAGATGAGGCAATTTTTCACAGCGGAGAGGGAAGATatcttgcttcttcttcaagtACATCTCGGTCATATTGCAGCAGAAGCTTTTTACTCGAAACGGGCTCACCACAATCCCCTCCAAATATGTTCTCAGTCTG 2018 0.4361 MECGLVFFGLLAFLGMQLPLMMAGCPLDFSGSNFTLASSICSSQGDRGKCCRYINANIAVSVARYANATSNLGVAPNVSDVCLQTISETLQLYGVPRNATVFCGVGTKIPFNYDCKGRNTVTQMLLSPRFMDVMENCKAPLVEQSKCKKCLNAGIGYLHHVIGIEVDNITLSTCRDAAFAALASQGDARSTVDIASCFFGVQGLLVPPASEPSPSLPTTEASPSPLVADGPSQLMLGVPIKESHRSYHLTLIPGIGIAVIVVAVVLLIVLIVLISQKSRELEGTDNLGKASSKGLPPCATWKFQEGPSSTFRKFNYKDIKRATENFSTIIGQGGFGTVYKAHFGDGLMAAVKRMNKVSEQGEEEFCREIELLARLHHRHLVSLKGFCIKKHERILMYEYMDNGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKVADFGLALASTNGSICFEPANTDIRGTPGYMDPEYVVTQELAEKSDIYSFGVVLLEIVTGRRAIQDDRNLVEWAQPYMKSDTRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRERPSIKQVLRLLYETSEPMNSEFAEAVENGEYEKNHLRGRRSKGQIHRDEAIFHSGEGRYLASSSSTSRSYCSRSFLLETGSPQSPPNMFSV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00305 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Bva13g00305 672 ProSiteProfiles Protein kinase domain profile. 324 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00305 672 Gene3D Phosphorylase Kinase; domain 1 299 399 - -
Bva13g00305 672 Gene3D Transferase(Phosphotransferase) domain 1 400 618 - -
Bva13g00305 672 CDD STKc_IRAK 330 592 - -
Bva13g00305 672 SUPERFAMILY Protein kinase-like (PK-like) 307 595 IPR011009 -
Bva13g00305 672 Pfam Protein kinase domain 328 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00305 672 SMART serkin_6 324 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00305 672 PANTHER BNAC06G02630D PROTEIN 7 672 - -
Bva13g00305 672 Pfam SPARK 24 154 IPR043891 -
Bva13g00305 672 PANTHER OS01G0750732 PROTEIN 7 672 - -
Bva13g00305 672 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00305 Bva-Chr13 1431578 1436424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00305 18 671 Receptor kinase-like Gene Family AT3G19300 59.361 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Bva13g00305 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00305 - - gmx:100807955 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00305 13 1431578 1436424 Bva13g00305 13 1431578 1436424 ECH