Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00287 ATGGTGGTCTCAAAATCGACATACGAGGAATGCAGGCGACAGAGGCTCGAGGAGAACAAGAAGAGGATGGAGGAGCTCAACCTCCACAAGCTTGCTAAGTCTTTGAAACCTTCCCCATCATCAAAGTCCTCTCCTGCGAAGCCGAAGGGGCCTCGCCGAATGAGCCCTTATTCTGTACCAGTGAGAAGGTCTAGCCGCGTCGCAAGCATGCCTCCTGCAAACTACAAGGAAGCCCCACTTAAGCCTCTGCTGAGACCTAGAAGGGGCTATCAAAGAAGGGACTTACTAAACCGAGTTTATGCTTCAGACGTAGTTAGACAATATGCAATTGATAGAGCAGAAGAACTCATGTCAGGTTTAGATTCTGGACATCCGAGTTTCATCAAGCCTATGCTTCAGTCACATGTAACTGGAGGATTTTGGCTGGGCCTTCCGGTTCAATTTTGTAAGACGCACCTGCCGCAACACGATGAAATGATAGCTTTGGTGGACGAGGATGGGAATGAATCTCTGACAAAGTACCTTGCTGATAAAACTGGTCTCAGCGGTGGTTGGCGAGGTTTTGCAATTGATCATGAACTAGTCGACGGGGACGCATTGGTGTTTCACTTGATTAAACCTACCAAATTTCAGGTGTACATAATCAGGGCACACGAATCAGAAGACAATGAGGAAAATACaccaacaaaggaagaaaaagaggagGATCTGGATGCCACACTATTGAACCGGAGCTCCAAGAGAACCAGAACAAGATA 758 0.4591 MVVSKSTYEECRRQRLEENKKRMEELNLHKLAKSLKPSPSSKSSPAKPKGPRRMSPYSVPVRRSSRVASMPPANYKEAPLKPLLRPRRGYQRRDLLNRVYASDVVRQYAIDRAEELMSGLDSGHPSFIKPMLQSHVTGGFWLGLPVQFCKTHLPQHDEMIALVDEDGNESLTKYLADKTGLSGGWRGFAIDHELVDGDALVFHLIKPTKFQVYIIRAHESEDNEENTPTKEEKEEDLDATLLNRSSKRTRTR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00287 252 MobiDBLite consensus disorder prediction 221 252 - -
Bva13g00287 252 Coils Coil 13 33 - -
Bva13g00287 252 Gene3D - 105 220 IPR015300 -
Bva13g00287 252 CDD B3_DNA 125 216 IPR003340 GO:0003677
Bva13g00287 252 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 3 221 IPR044837 -
Bva13g00287 252 MobiDBLite consensus disorder prediction 1 80 - -
Bva13g00287 252 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS06G0194400 3 221 - -
Bva13g00287 252 SUPERFAMILY DNA-binding pseudobarrel domain 120 218 IPR015300 -
Bva13g00287 252 ProSiteProfiles B3 DNA-binding domain profile. 127 218 IPR003340 GO:0003677
Bva13g00287 252 Pfam B3 DNA binding domain 127 217 IPR003340 GO:0003677
Bva13g00287 252 MobiDBLite consensus disorder prediction 8 31 - -
Bva13g00287 252 MobiDBLite consensus disorder prediction 221 245 - -
Bva13g00287 252 SMART B3_2 127 218 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00287 Bva-Chr13 1350425 1352044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00287 1 238 B3 DNA Binding Superfamily AT3G19184 61.290 7.80e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva13g00287 B3 6.2e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00287 - - vvi:100262457 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00287 13 1350425 1352044 Bva13g00287 13 1350425 1352044 ECH