Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00269 ATGGGTTCGGTTCATGCAGAACTGAGCTTGGATTTAAAACCCACTTTTCTTCCCAAAACGATCACTGATTTTCTCTACGAGGTTTCCACGATCGGTAATGCCGCCGAGAAGCGTTTGAGGCTCGATGATTATGTTGAGAGATTGGAAGAGGAAATGAGGAAGATCGACGCGTTTAAGCGCGAGCTTCCTCTTTGTATGCTTATTATGAATGATGCAATTTTGGTTCTAAAAGATGAATCAGCAAAATGGAGGATACCTAATTCTCAGTCAATATTGGAAGAATTTATTCCCCTGAAAAAGGAATGTGATCAGAaggaggaaataaaaaaagaaaaggaaaacagagaCAAGAAGAATTGGATGAGTTCTGTTCAGCTTTGGAACACTCCTTCCGtttatgaaaagaagaattggATGAGTTCTGTTCAGCTTTGGAACACTGCTATTTATCCCACTACTGCTAATAATAACTTTGAGCAAAAACAACATCTGAAAGTAGAAAacaagaaaatgaaggaagaaggaaaatcTGCAGCTGAGGATTCATATCAACCTTCCATAAATAGAAGTACAAATGGATGCAGAGCATTTATGCCTTTCACATATCCTGCTGTGCCAGTAGCAATGATAAAGGAAGAGAAGGCAGCAaagatcaaggaagagaaagaagaatctGTAATTAATGGGCTTTCTCTCTCAACTCCTGGGATTAAGAAGACGAATACAAGGGAGAGTGCTGGTGCAAGTGGATCCATAACCAGCTCTAACAGTGCAGTTTCCTCTTCTCCCTCTCCTCCCAGTGCTCAAGCAAATCTACACCCTGGACCACAGCAAAGTTCGCGAAAACAGAGAAGATGCTGGTCACCAGAGCTGCACCGTCGATTTGTTAACGCGCTGCAGCAACTTGGAGGTTCTCAagCAGCAACTCCAAAGCAAATTCGAGAACTCATGCACGTTGATGGCCTTACTAATGATGAAGTGAAAAGCCATTTACAAAAATACCGACTTCACACTCGAAGAATTCATCCCGCGATATCTACTCCTGCGAATCAGTCATCTGCTGTTCTTGGAGATTTGTGGATGTCCCAAGATCAATATAGTGACTCCACCAAGACTACGGGTTTCCAGTCTGCTTCTCCTGAAGGCCCACTCCAGTTAGCAAGATCTGCTCGAGGGTCGTCTCCACCTGAAGATAAAAGTATACGTGGGAGGAGTTTTACAACTACATA 1229 0.3963 MGSVHAELSLDLKPTFLPKTITDFLYEVSTIGNAAEKRLRLDDYVERLEEEMRKIDAFKRELPLCMLIMNDAILVLKDESAKWRIPNSQSILEEFIPLKKECDQKEEIKKEKENRDKKNWMSSVQLWNTPSVYEKKNWMSSVQLWNTAIYPTTANNNFEQKQHLKVENKKMKEEGKSAAEDSYQPSINRSTNGCRAFMPFTYPAVPVAMIKEEKAAKIKEEKEESVINGLSLSTPGIKKTNTRESAGASGSITSSNSAVSSSPSPPSAQANLHPGPQQSSRKQRRCWSPELHRRFVNALQQLGGSQATPKQIRELMHVDGLTNDEVKSHLQKYRLHTRRIHPAISTPANQSSAVLGDLWMSQDQYSDSTKTTGFQSASPEGPLQLARSARGSSPPEDKSIRGRSFTTT 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00269 408 MobiDBLite consensus disorder prediction 232 284 - -
Bva13g00269 408 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 129 IPR044787 GO:0003700|GO:0006355
Bva13g00269 408 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 133 393 IPR044787 GO:0003700|GO:0006355
Bva13g00269 408 MobiDBLite consensus disorder prediction 365 408 - -
Bva13g00269 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 279 338 IPR017930 -
Bva13g00269 408 MobiDBLite consensus disorder prediction 232 286 - -
Bva13g00269 408 Coils Coil 34 61 - -
Bva13g00269 408 PANTHER TRANSCRIPTION FACTOR HHO6 7 129 - -
Bva13g00269 408 PANTHER TRANSCRIPTION FACTOR HHO6 133 393 - -
Bva13g00269 408 MobiDBLite consensus disorder prediction 170 189 - -
Bva13g00269 408 Pfam Myb-like DNA-binding domain 284 334 IPR001005 -
Bva13g00269 408 Gene3D - 279 341 - -
Bva13g00269 408 MobiDBLite consensus disorder prediction 365 382 - -
Bva13g00269 408 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 282 336 IPR006447 GO:0003677
Bva13g00269 408 SUPERFAMILY Homeodomain-like 280 339 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00269 Bva-Chr13 1274729 1277179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00269 6 360 G2-like Transcription Factor Family AT2G03500 37.736 4.63e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva13g00269 Myb_DNA-binding 9.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00269 - - rcn:112174025 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00269 13 1274729 1277179 Bva13g00269 13 1274729 1277179 ECH