Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00206 ATGGCAGACAATAGTCCTAGTAGTTCCCCTCCTTCCCCTAATTCGGAAtcatcaccaccaccaccatcacCACCAGACGATTCTTCTCCATCGTCACCAACCCCAAAGCAATCGCCGCCATCTTcttcaccaccaccaccagcaCCAAAGCAATCTCCACACCCACCATCGTCACCTCCGCCACCTTCTTCGTCAAATGATGGTAACGAATCACCACCGCCACCCTCCAATGATAGTGGTGGTAACAACAATTCTCCACCCCCAAGTCCGCCTAATTCTAACAATGACGGCCGGGGGAAATCAGGCACACCACCTTCGCCGCCGCCGCCAAAGGGGTCGAACCAAGATTCCTCATCTCCCTCTTCTTCGCATCGATTGTCCCCATCGGAACACAATTCAGCACGTAACTCATCAAAGTCAGCTTCGACAGATTCGCCATCGTCAGATGGCAGTAGCGGAAATGCATTAAGCGTAAATGCTATAGTAGGAATAGCTGCTGCAGTTGCGATATTAATTACTCTCATGATAATATTGACCTATTGCTGtatgagaaagaagaagagaccTCAGAATATTCATCACTATCATAATCATCCCGAGTATTTCAAAAATGCAACAGCTCATAATCAACAGTGGAATGCTAATGGTGACCACGTTGTCAATATACCACCACCACCGGGTGCAGCTCAAAAAAGTTGGACACCATCCCCACGTAATCAAATGCCTAGCAGTGACATTATAAGTGACGCTAGTTATTCTGGCCCACATGGTCCTGCGTTGCCCCCTCCACACCCTTCAGTGGCTCTTGGATTTAATAAGAGCACTTTCTCTTACGAAGAGCTATCAGCTGCTACCGGTGGTTTTTCCTCAAGTAATCTTCTGGGGCAAGGTGGGTTCGGTTATGTGCATAAAGGTGTGTTGCCCAATGGTAAAGAGATAGCTGTGAAAAGTCTTAAGTCCACTGGAGGCCAAGGAGATAAAGAATTCCAAGCCGAGGTTGATGTTATTAGTCGTGTCCACCACCGTTATCTTGTGTCACTTGTTGGCTACTGCTTTTCAGATGGCAAAAAGCTGTTGGTGTATGAATATGTGCCAAACAAGACCCTCGAATACCACCTTCACGgAAAAGGTCGCCCTGTAATGGATTGGGGCACTAGGATCAAAATTGCGATTGGATCAGCAAAAGGACTTGCTTACTTGCACGAGGATTGTCATCCTCGTATCATTCACCGTGACATAAAGGGCGCAAACATTCTAATCGAGAACAATTTTGAAGCCAAGGTTGCAGATTTTGGTTTGGCCAAGTTTAATCAAGATAATTACACTCATGTTTCTACTCGCGTAATGGGAACATTTGGatATTTGGCTCCTGAATATGCATCGAGTGGTAAATTAACTGAAAAGTCTGATGTCTTCTCCTATGGTATCATGCTTTTGGAGCTTATAACGGGACGACCACCCATAGATACTACCGGTGAATACCAGGAGGATAGTTTGGTTGATTGGGCTAGACCCCTATGCATAAATGGAATGGACACTGGAAACTTTGAAGGACTGGTAGATCCACGCTTGGAGAACAATTATGATAGAAATGAGATGGCACGCATGATAGCTTGTGCTTCTGCAAGCGTAAGACATTCGGCAAGAAAGCGGCCAAAAATGAGCCAGATTGTGCGTGCATTGGAGGGTGATGTGTCCCTGGATGACTTAAGTGAAGGGGGTGTGAAACCTGGCCAAAGCACAGTTTTTGGTGGTGCTAGTGGTGAATATGATGCAAGCGCATATAGCGCTGACATAAAGAAATTCAGAAAGTTGGCATTCGATAGCAGCCATGATAGCAGTGACTGTGGGGCAACGAGTGAATATGGGCTTAACCCTTCAGCCTCAAGCAGCGACAGATCTTCAGAATTTGGCAAGAGGACATG 1925 0.4462 MADNSPSSSPPSPNSESSPPPPSPPDDSSPSSPTPKQSPPSSSPPPPAPKQSPHPPSSPPPPSSSNDGNESPPPPSNDSGGNNNSPPPSPPNSNNDGRGKSGTPPSPPPPKGSNQDSSSPSSSHRLSPSEHNSARNSSKSASTDSPSSDGSSGNALSVNAIVGIAAAVAILITLMIILTYCCMRKKKRPQNIHHYHNHPEYFKNATAHNQQWNANGDHVVNIPPPPGAAQKSWTPSPRNQMPSSDIISDASYSGPHGPALPPPHPSVALGFNKSTFSYEELSAATGGFSSSNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDKEFQAEVDVISRVHHRYLVSLVGYCFSDGKKLLVYEYVPNKTLEYHLHGKGRPVMDWGTRIKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILIENNFEAKVADFGLAKFNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGIMLLELITGRPPIDTTGEYQEDSLVDWARPLCINGMDTGNFEGLVDPRLENNYDRNEMARMIACASASVRHSARKRPKMSQIVRALEGDVSLDDLSEGGVKPGQSTVFGGASGEYDASAYSADIKKFRKLAFDSSHDSSDCGATSEYGLNPSASSSDRSSEFGKRT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00206 641 MobiDBLite consensus disorder prediction 232 250 - -
Bva13g00206 641 MobiDBLite consensus disorder prediction 215 259 - -
Bva13g00206 641 Gene3D Transferase(Phosphotransferase) domain 1 364 570 - -
Bva13g00206 641 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Bva13g00206 641 MobiDBLite consensus disorder prediction 612 634 - -
Bva13g00206 641 MobiDBLite consensus disorder prediction 1 153 - -
Bva13g00206 641 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 13 614 - -
Bva13g00206 641 Pfam Protein tyrosine and serine/threonine kinase 291 561 IPR001245 GO:0004672|GO:0006468
Bva13g00206 641 SMART serkin_6 288 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00206 641 MobiDBLite consensus disorder prediction 115 153 - -
Bva13g00206 641 SUPERFAMILY Protein kinase-like (PK-like) 266 561 IPR011009 -
Bva13g00206 641 MobiDBLite consensus disorder prediction 79 93 - -
Bva13g00206 641 MobiDBLite consensus disorder prediction 609 641 - -
Bva13g00206 641 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 13 614 - -
Bva13g00206 641 Gene3D Phosphorylase Kinase; domain 1 265 363 - -
Bva13g00206 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Bva13g00206 641 ProSiteProfiles Protein kinase domain profile. 288 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00206 641 MobiDBLite consensus disorder prediction 12 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00206 Bva-Chr13 999019 1002471 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00206 152 639 Trihelix Transcription Factor Family AT1G70460 51.318 1.59e-155 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva13g00206 PK_Tyr_Ser-Thr 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00206 - - gmx:100806299 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00206 13 999019 1002471 Bva13g00206 13 999019 1002471 ECH
Bva13g00206 13 999019 1002471 Bva14g00275 14 1420877 1424320 ECH