Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00201 ATGACGCCTTCCGGCAATGCCATGCCTGAAATTCCTAACAAAACCCCTCTTATGGGTTTGAAAGTCTATATCGCGATAGGTGTTCTCCTCTTAATCGTGGTAGCTATTGTGCTGCTGATTTTCATCTGCATTCGACGGAATCGAAGATCAACGAAACGTAGAATGCGCGTAAAGCACAGCTCCGGCACAATCCCTTTGGTTTCCAAGGAGATCGTCGAGGTTAAAGACTTGGATCTCACTCAAGATTGTGAACAAGCAGagcttaaaattgaaaatgtcgatacgaagaagaagaaagaggaggCACAGGCAGAGGTTAAAGTTGATAttggaagaagaggaaaggGTGGCGGCGGAGAGACTGACGTGTCCGGTGGGAACCGCAGTGAGGTGCCGGTGGATGATCCGAACATAGGGTGGGGACGTTGGTATAGCTTGAACGAGCTGGAGCTTGCTACGCATGAGTTTGCTGATCAGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTACAGAGGAGTTCTACAGGACGGGTCTGTGGTGGCTGTGAAGAATCTTTTAAACAATAAGGGTCAAGCAGAGAAGGAGTTTAAGGTAGAGGTTGAAGCAATTGGGAAAGTAAGGCATAAGAATTTAGTGGGTTTAGTTGGATATTGTGCTGAAGGTGCTCGAAGGATGCTTGTGTACGAATATGTTGACAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTAAGGCCCGTTAGCCCCTTGACATGGGATATACGAATGAGGATTGCTATTGGGACAGCAAAAGGGCTAGCTTATTTGCATGAAGGCTTGGAACCCAAAGTTGTGCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAGAAAGTGGAATGCCAAAGTATCAGACTTTGGACTGGCCAAGCTCTTGGGACCTGAGAAAAGCTACGTGACTACACGTGTAATGGGGACATTTGGATATGTTGCACCTGAGTATGCCAGCACAGGAATGCTTAACGAGGCCAGTGATGTGTATAGCTTTGGAGTTCTACTCATGGAGATAATTACAGGAAGAAGTCCCATTGATTATTCTAGGGCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAGGGGATGATATCAAGTCGTCGTTCGGATGAACTTGTGGATCCTTTAATTGAGATTCATCCCTCTCCAAGATCTTTAAAGCGAGCTTTACTGGTTTGTCTGCGCTGTATAGATTCTGAGGTCACTAAGCGACCAAAGATGGGTCAGATTGTTCATATGCTTGAAGCAGATGATTTCCCATATCGATCTGAACTTCGTATTGtaagggagaaagaaaatgttccTTCTCAATCAGTTGTTTCCGGTAAAGTTTCATATCCCCCAAGGCATGTGGAATCAGTGGACAGATCAAGGTGGAGATG 1421 0.4293 MTPSGNAMPEIPNKTPLMGLKVYIAIGVLLLIVVAIVLLIFICIRRNRRSTKRRMRVKHSSGTIPLVSKEIVEVKDLDLTQDCEQAELKIENVDTKKKKEEAQAEVKVDIGRRGKGGGGETDVSGGNRSEVPVDDPNIGWGRWYSLNELELATHEFADQNVIGEGGYGIVYRGVLQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGARRMLVYEYVDNGNLEQWLHGDVRPVSPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLGPEKSYVTTRVMGTFGYVAPEYASTGMLNEASDVYSFGVLLMEIITGRSPIDYSRAPGEMNLVDWFKGMISSRRSDELVDPLIEIHPSPRSLKRALLVCLRCIDSEVTKRPKMGQIVHMLEADDFPYRSELRIVREKENVPSQSVVSGKVSYPPRHVESVDRSRWR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00201 473 MobiDBLite consensus disorder prediction 111 131 - -
Bva13g00201 473 PANTHER OS01G0323000 PROTEIN 12 445 - -
Bva13g00201 473 ProSiteProfiles Protein kinase domain profile. 156 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00201 473 SMART serkin_6 156 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00201 473 Gene3D Transferase(Phosphotransferase) domain 1 232 440 - -
Bva13g00201 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Bva13g00201 473 SUPERFAMILY Protein kinase-like (PK-like) 132 428 IPR011009 -
Bva13g00201 473 ProSitePatterns Protein kinases ATP-binding region signature. 162 184 IPR017441 GO:0005524
Bva13g00201 473 Gene3D Phosphorylase Kinase; domain 1 139 231 - -
Bva13g00201 473 Coils Coil 83 105 - -
Bva13g00201 473 Pfam Protein kinase domain 158 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00201 473 CDD STKc_IRAK 162 428 - -
Bva13g00201 473 PANTHER OS03G0227900 PROTEIN 12 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00201 Bva-Chr13 971488 975102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00201 4 430 Trihelix Transcription Factor Family AT1G70460 40.046 3.14e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bva13g00201 Pkinase 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00201 - - jre:109011190 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00201 13 971488 975102 Bva13g00201 13 971488 975102 ECH
Bva13g00201 13 971488 975102 Bva14g00271 14 1393754 1396804 ECH