Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00194 ATGGTGGATCGGCGAAGCATAGTGTCTTTTGGgttcttgttcttgttgtGGTTTCAGCTCACATTTGAGCAGCTTGAGCCACTGAGTTCATCCACAGAGCGAGCAGCACTACTTGAGCTTAGGTCGTCTTTGGGCTTGAGGAGCAAGGAATGGCCAAGAAAGGCCGAGCCTTGTTTTATCTGGAAAGGCGTGCAGTGCGAGAATGGTAGAGTTGTTGGGATCAATATTTCTGGGTTTAGAAGAACCCGAATTGGGCGGCAAAACCCACAATTCGCAGTCGATGCCTTGGCCAATTTCACGTTCTTGCAGTCCTTCAATGTCTCCAATTTTCTCCTCCTTGGTCCTATTCCTGACTGGTTTGGCCAGCGGCTTCCTTCCCTAAGAGTGCTTGATCTTCGTTCTTGCTCTATCAATGGTTCTATTCCTTTCAGTCTAGGGAATTTAACCAGTCTAACTAGTCTGTATCTATCTGATAATAGCCTTACTGCCCAAATTCCTGATACTTTACGTCAACTATTAGGCCTTTCAGTACTTGATCTTTCGCGAAATTCTCTTACTGGATCCATACCCCCATGGTTTACCTTTCTGGGGAATCTTTCATCTCTTGACATTTCTGCCAACTTCTTTTCCGGGCCGATTCCCTCTGGCATTGGGACTCTTTCCAAGTTACAAtacttgaatctttcccacaACAGTCTAACTTCTTCCATACCTATTCAAGTGGGGAATCTCAGTAGCTTGGTTGACCTTGATCTTAGTGTTAATTCATTGTCTGGTCTGGTGCCTCCGGATTTAAGAGGTTTGAGGAACTTGGAGAGATTGATACTAGGTAACAATACACTTGGTGGGCCTTTTCCGGAGAACATATTTCAAAGTTTATTACAGTTGCAGTTCATAGTGCTTAGTCATAATAATATCTCTGGTGCTTTGCCTGATGAATTGTGGTCTCTGCCAAGATTGCGTTTCGTTGATGTCTCCTGGAATAACTTCGCTGGTATGCTTCCAAATTCTAGTCTCATCGCTAATGCAACTTCTGCGGAGCTCaatatttctcataatttgttttatggaGGCCTTACTCCTGTACTTCGAAGGTTCAGTTTCATTGACCTGTCAAGCAATTATTTTGAGGGTATGGTTCTGGATTTCCTGCTTAATAATGCATCTCTAGACAGCAACTGCCTCCAAAACGTGTCAAATCAAAAGACATCAGTAGAATGTGCATCCTTCTATACTGAGAGGGGTCTggcttttgataattttggacGCAGAAATTTGACAGAACCTCCTGCGGCAGAAAATGGTGGAAagaacaatagaaataaaattatactggCATCAGTACTGGGTGGATTTGGTTTAATTGTACTTATGGTATTGGTACTAATATTGCTGCTTCTGTGTGCTCGTAAGAGGCGTAATTCTAATCACAGAGGAAATGGTGTTGGCCCTGCTCCAGCTGGGGGAAGTCCTCCGCCTCCTGGGGTATTAATCAGCTTCTCAACTGTAGGAGACTCGTTTACATACCAGCAGTTGCTCCAGGCCACAGGTTTCAGTGATACAAATCTTATCAAACATGGCCACGCTGGGGACCTATTCAACGGTGTTTTGGAAAATGGAATTCCAGTAGTCATCAGAAGGATTGATATGTgttcaaataaaaaggatgCATATATATCGGAATTGGACTTTTTCAGGAAGGTTTCCCATCCAAGATTTGTTCCCCTGTTGGGACATTGCTTAGacaatgaaaatgagaaattccTTGTTTATAAACATATGCCAAATGGGGACTTGTCGAATTGTTTGTACAGAAAAACTACATCTGAAGATGGTACTTTGCAGTCTTTGGATTGGATAACTAGATTGAAAATTGCTACTGGAGTCGCGGAGGCTCTTTCTTATCTGCATCATGAATGTAATCCACCCTTTGTTCACAGAGATATTCAAGCGAGCAGTATACTATTAGATGATAAATATGAAGTGCGATTAGGGAGCCTAAGTGAAGTTTGCACCCAGGAAGGGGATCCTCATCAAAGCAAGATTACGCGGTTTCTGCGGTTTCCCCAGTCCTCTGAGCAAGGCACCTCTGGTTTGTCCACATCAATTTGTGCCTATGATGTGTATTGCTTTGGGAAAATATTACTTGGGTTAGTGACTGGTAAGCTTGGAATCAGCGGATCCAGTGACATTGAAGAAAAGGAATGGTTGGAACAGACGTTATCATGCATTAGTATTTATGATAAGGAGCTTGTGACAAAAATTGTGGATCCATCTATGATTGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCAGTGGCCATTGTGGCTAGGTCTTGCTTGAACCCCAAACCTTCGAGACGACCACCGATGAAATATGTTCTCAAGGCTCTGGAAAACCCTTTAAAAGTGGTAAGGGAAGAAAATTCCAGCTCTGCACGGCTTAGAGCAACCTCTTCTAGAGGCTCTTGGAATGCTGCTTTGTTTGGCAGTTGGCGTCAAAGTTCATCTGATGTAACAGCAATTCCATCAGCCTCTGGTGCAAGAATAGAAGGAGTGAGTAGTTTAAAGCATTCACCAACTACTGGCTCACAGGGTAGCAACCAGAATGGTGGGGGTGACTCTTCATCACGAAGACGACATTCGAAGGAGATATTCCCAGAACCATCAAATGTTCAAGACGTAGAGAGACTGGAACATGAGTA 2705 0.4159 MVDRRSIVSFGFLFLLWFQLTFEQLEPLSSSTERAALLELRSSLGLRSKEWPRKAEPCFIWKGVQCENGRVVGINISGFRRTRIGRQNPQFAVDALANFTFLQSFNVSNFLLLGPIPDWFGQRLPSLRVLDLRSCSINGSIPFSLGNLTSLTSLYLSDNSLTAQIPDTLRQLLGLSVLDLSRNSLTGSIPPWFTFLGNLSSLDISANFFSGPIPSGIGTLSKLQYLNLSHNSLTSSIPIQVGNLSSLVDLDLSVNSLSGLVPPDLRGLRNLERLILGNNTLGGPFPENIFQSLLQLQFIVLSHNNISGALPDELWSLPRLRFVDVSWNNFAGMLPNSSLIANATSAELNISHNLFYGGLTPVLRRFSFIDLSSNYFEGMVLDFLLNNASLDSNCLQNVSNQKTSVECASFYTERGLAFDNFGRRNLTEPPAAENGGKNNRNKIILASVLGGFGLIVLMVLVLILLLLCARKRRNSNHRGNGVGPAPAGGSPPPPGVLISFSTVGDSFTYQQLLQATGFSDTNLIKHGHAGDLFNGVLENGIPVVIRRIDMCSNKKDAYISELDFFRKVSHPRFVPLLGHCLDNENEKFLVYKHMPNGDLSNCLYRKTTSEDGTLQSLDWITRLKIATGVAEALSYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEVCTQEGDPHQSKITRFLRFPQSSEQGTSGLSTSICAYDVYCFGKILLGLVTGKLGISGSSDIEEKEWLEQTLSCISIYDKELVTKIVDPSMIVDEDFLEEVWAVAIVARSCLNPKPSRRPPMKYVLKALENPLKVVREENSSSARLRATSSRGSWNAALFGSWRQSSSDVTAIPSASGARIEGVSSLKHSPTTGSQGSNQNGGGDSSSRRRHSKEIFPEPSNVQDVERLEHE 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00194 901 PRINTS Leucine-rich repeat signature 220 233 - -
Bva13g00194 901 PRINTS Leucine-rich repeat signature 175 188 - -
Bva13g00194 901 PANTHER BNAA07G03560D PROTEIN 175 847 - -
Bva13g00194 901 PANTHER BNAA07G03560D PROTEIN 10 187 - -
Bva13g00194 901 SMART LRR_typ_2 244 267 IPR003591 -
Bva13g00194 901 SMART LRR_typ_2 124 145 IPR003591 -
Bva13g00194 901 SMART LRR_typ_2 172 195 IPR003591 -
Bva13g00194 901 SMART LRR_typ_2 293 317 IPR003591 -
Bva13g00194 901 SMART LRR_typ_2 148 171 IPR003591 -
Bva13g00194 901 SMART LRR_typ_2 220 243 IPR003591 -
Bva13g00194 901 SMART LRR_typ_2 268 292 IPR003591 -
Bva13g00194 901 MobiDBLite consensus disorder prediction 849 901 - -
Bva13g00194 901 Gene3D Ribonuclease Inhibitor 289 428 IPR032675 -
Bva13g00194 901 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Bva13g00194 901 PANTHER RECEPTOR-LIKE PROTEIN 55 175 847 - -
Bva13g00194 901 PANTHER RECEPTOR-LIKE PROTEIN 55 10 187 - -
Bva13g00194 901 SUPERFAMILY Protein kinase-like (PK-like) 508 798 IPR011009 -
Bva13g00194 901 MobiDBLite consensus disorder prediction 855 875 - -
Bva13g00194 901 Gene3D Ribonuclease Inhibitor 185 288 IPR032675 -
Bva13g00194 901 ProSiteProfiles Protein kinase domain profile. 518 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00194 901 SUPERFAMILY L domain-like 89 419 - -
Bva13g00194 901 Gene3D Transferase(Phosphotransferase) domain 1 594 820 - -
Bva13g00194 901 Gene3D Phosphorylase Kinase; domain 1 497 593 - -
Bva13g00194 901 Pfam Leucine rich repeat 150 207 IPR001611 GO:0005515
Bva13g00194 901 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Bva13g00194 901 Pfam Protein tyrosine and serine/threonine kinase 524 743 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00194 Bva-Chr13 940084 945044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00194 32 690 Miscellaneous Gene Families AT2G16250 56.842 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Bva13g00194 PK_Tyr_Ser-Thr 3.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00194 - - gmx:100805769 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00194 13 940084 945044 Bva13g00194 13 940084 945044 ECH