Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00193 ATGGCTGCTGCCGACGTTGAGTTCAGATGCTTTGTTGGTGGGCTCGCATGGGCCACCGACAACGATGCTCTCCAGAGCGCTTTCTCTCCATATGGCGAGATCATCGAATCGAAGGTTATCAACGACCGTGAGACCGGAAGGTCTAGGGGTTTTGGATTCGTTACCTTCGCTTCCGAGCAGGCTATGAGGGATGCCATAGATGCTATGAACGGCAAGGAGCTGGATGGCCGTAACATTACAGTCAACGAGGCTCAGTCTCGCGGAGGGAGCGGTggtggcggcggcggcggTTACAGCCGCGGTGGTGGTGGATATGGTGGCGGTGGCGGCTACAGCCGTGGAGGAGGTGGAtacggcggcggcggccgtcGCGAAGGGGGTTACAACCGTAATGGTGGTGGCAGTTACGGTGGTTATGGAGGTGGTGGTGGTTACGGTGGAAGTCGTGACCGTGGTGGTTACGGTGACGGTGGATCTCGCTACTCTAGGGCTGGTGGTGCTACCGAAGGAACTTGGAGGAATTA 524 0.5267 MAAADVEFRCFVGGLAWATDNDALQSAFSPYGEIIESKVINDRETGRSRGFGFVTFASEQAMRDAIDAMNGKELDGRNITVNEAQSRGGSGGGGGGGYSRGGGGYGGGGGYSRGGGGYGGGGRREGGYNRNGGGSYGGYGGGGGYGGSRDRGGYGDGGSRYSRAGGATEGTWRN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00193 174 SMART rrm1_1 9 82 IPR000504 GO:0003723
Bva13g00193 174 MobiDBLite consensus disorder prediction 82 103 - -
Bva13g00193 174 MobiDBLite consensus disorder prediction 139 174 - -
Bva13g00193 174 SUPERFAMILY RNA-binding domain, RBD 8 96 IPR035979 GO:0003676
Bva13g00193 174 PANTHER GEO13361P1-RELATED 1 129 - -
Bva13g00193 174 Gene3D - 2 109 IPR012677 -
Bva13g00193 174 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Bva13g00193 174 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 129 - -
Bva13g00193 174 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00193 Bva-Chr13 932237 933320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00193 2 88 Eukaryotic Initiation Factors Gene Family AT2G23350 36.364 1.76e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00193 - K13195 lja:Lj1g3v2296520.2 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00193 13 932237 933320 Bva13g00193 13 932237 933320 ECH