Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00191 ATGGCCCAAAGCTCTCTCAGCAAACAAAAAACGTCTGACTCTTCTTGGACTCCAAAGCAGaacaaactttttgaaaaggCATTAGCAAAATATGATAAGGATACCCCTGATCGCTGGAGGAACGTAGCCAAAGCTGTTCGTGACAAATCTCCAGAGGAAGTTAAGAGGCACTATGACGTCCTTATAGAGGATCTCAGACACATAGAGTCTGGTCGTGTTCCCATTCCCAATTACAAATCCACAGCAAGCAGCAGCAAtgctgatgaagaagaaagGCTTCTGAAGTATCTGAAGCTCAATTG 302 0.3974 MAQSSLSKQKTSDSSWTPKQNKLFEKALAKYDKDTPDRWRNVAKAVRDKSPEEVKRHYDVLIEDLRHIESGRVPIPNYKSTASSSNADEEERLLKYLKLN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00191 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Bva13g00191 100 SMART sant 12 64 IPR001005 -
Bva13g00191 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Bva13g00191 100 CDD SANT 15 58 IPR001005 -
Bva13g00191 100 PANTHER PROTEIN RADIALIS-LIKE 3 1 82 - -
Bva13g00191 100 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Bva13g00191 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Bva13g00191 100 ProSiteProfiles SANT domain profile. 11 58 IPR017884 -
Bva13g00191 100 Gene3D - 6 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00191 Bva-Chr13 924763 926451 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva13g00191 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00191 - - gmx:100798314 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00191 13 924763 926451 Bva13g00191 13 924763 926451 ECH
Bva13g00191 13 924763 926451 Bva14g00262 14 1351855 1352866 ECH
Bva13g00191 13 924763 926451 Bva08g00746 08 3869768 3869989 ECH