Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00190 atgaacaaaaatattattagtaatCACAATAACATGTTGCACTGTCTCAACACTTCGGGGAATCTCTCAGGGAACTGCTCGAACATGACAGCGTTGGAAAGGCAAAGGGCAAGGACGAAGATGCAACAGGACCAACAAcatcttcaacttcaacaacaacaacaacagaaCCAGCAAATACATCAAAGCTATTTTTATGGAACTGCGTTTAACTCTGTCTTCTCACCACTTCAACTGCAACTCGAGAATTCTCAGGGGTTGATCATGGCTGCTGGCGGCACCCACTCGTCGCTCGATGAAATCGTAGCTCAAGCTCCGTCATTGAAGCCTGAACCGGGTTTGGCAAATGGGTGGCCCGAATTGGGGAAGTTTGATATGCCTGCTGTGGGATTCGGGTCATCTGGGGTGGATGTGAATTCTGCGATTTCAAGGACTTATAGCTGCCCACCATCTGTGGCAGTAAAAGCAGTTGCCGACGGTAAAGGCAAGGACCCGATTATATCGATGAACTCTGCTAGTGGCGGCAGAGAAAATTTCAACAAGAGGAAAGCTGAGAAAACTCAGAACCTCAAGgttgttgcagaaaataataatcacaAAGACAAGAAGATCAAAGTGTGTGCTGAGGAAGGGGAATCCAAAATCACAGAGCAAACCAGCACCAAGAAAACCACAACCACCGCAAATAACAACAGTAAAGAAACATCTGCAGATACTTCTAAGGAAAATTCAAAAGCTTCTGAGGTTCAAAAGCCTGATTACATTCATGTCAGAGCACGTCGCGGTCAAGCTACCGATAGCCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATCAGCGAGAGAATGAAGTATTTGCAAGATTTAGTACCGGGTTGTAACAAAATTACAGGAAAAGCTGGAATGCTTGATGAAATCATCAACTATGTTCAATCCCTTCAAAGACAAGTAGAGTTCTTGTCAATGAAGCTAGCTGTTGTAAACCCAGGACTTGACTTCAACACTGATGATCTGTTTGCCAAAGATGTGTTTCCTGCTTGTGGCCCAAGTTATCCAACCATAGGTTTGTCATCAGCAGAAATGACCAACCCTGCATatcttcaattcaattcagcACAACAAATTATTTCGTGTTGTGGATTAGAAATGGGAATTAACCCTCCAGATACGGGGCTCAGAAGGGCCATCAGTGCACCTGTATCTTTCCCCGAAACGTTTCTTGACTCCACTGGTTTCACTCAAGTTGTACCGCCCACTACAGCTTGGGAAACTGATTTACAAAACCTTTACAATGTAGCTTTTGATCAAGCACGATCAACATCTTATCCTTCTCAACAATTTACAGCAGGTCCAATGGAAGCTAGAATTCTAAAGATGGAGATGTG 1385 0.413 MNKNIISNHNNMLHCLNTSGNLSGNCSNMTALERQRARTKMQQDQQHLQLQQQQQQNQQIHQSYFYGTAFNSVFSPLQLQLENSQGLIMAAGGTHSSLDEIVAQAPSLKPEPGLANGWPELGKFDMPAVGFGSSGVDVNSAISRTYSCPPSVAVKAVADGKGKDPIISMNSASGGRENFNKRKAEKTQNLKVVAENNNHKDKKIKVCAEEGESKITEQTSTKKTTTTANNNSKETSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAVVNPGLDFNTDDLFAKDVFPACGPSYPTIGLSSAEMTNPAYLQFNSAQQIISCCGLEMGINPPDTGLRRAISAPVSFPETFLDSTGFTQVVPPTTAWETDLQNLYNVAFDQARSTSYPSQQFTAGPMEARILKMEM 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00190 461 MobiDBLite consensus disorder prediction 212 251 - -
Bva13g00190 461 CDD bHLH_AtBPE_like 253 338 - -
Bva13g00190 461 Pfam Helix-loop-helix DNA-binding domain 267 314 IPR011598 GO:0046983
Bva13g00190 461 Gene3D - 260 328 IPR036638 GO:0046983
Bva13g00190 461 MobiDBLite consensus disorder prediction 218 237 - -
Bva13g00190 461 MobiDBLite consensus disorder prediction 166 197 - -
Bva13g00190 461 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 263 313 IPR011598 GO:0046983
Bva13g00190 461 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 29 441 - -
Bva13g00190 461 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 330 IPR036638 GO:0046983
Bva13g00190 461 MobiDBLite consensus disorder prediction 178 197 - -
Bva13g00190 461 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 29 441 IPR024097 GO:0006355
Bva13g00190 461 SMART finulus 269 319 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00190 Bva-Chr13 912055 915061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00190 124 375 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 46.953 4.55e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g00190 HLH 2.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00190 - - jre:109013802 479.174