Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00170 ATGGCTTCCTCAAGTGGAACATCTTCAGGGTCGACATCCTTGGTTCAAAACTCTGGTTCAGAGTCCGATTTGCAGGCTCTCATGGAccagaggaagaggaagaggatgaTATCAAATCGTGAATCTGCAAGAAGGTCTCGGATGAGAAAACAGAAGCATTTGGATGATCTGGTGGCCCAAGTGGCTCAGCTCAGGAAAGAAAACCAGCAAGTACTCACAAACGTTAACATCATCACTCAACAGTACTTGAGCGTTGAGGCTGAAAATTCAGTGCTCAAAGCTCAAGCGGATGAGCTAAGCCACAGATTGCAGTCTCTGAACGAGATCATCGATTTCTTGAATGCTAGCAATGGCGTTTTTGGAGCTGCAGGGGCATCATCAAGCACCTTCATTGAGCCCACCAATAGCTTCTTCAACCCATTAAACATGGCCTATCTGAATCAACCCATTATGGCTTCTGCAGATTTATTGCAGTATAGTTA 482 0.4295 MASSSGTSSGSTSLVQNSGSESDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAQLRKENQQVLTNVNIITQQYLSVEAENSVLKAQADELSHRLQSLNEIIDFLNASNGVFGAAGASSSTFIEPTNSFFNPLNMAYLNQPIMASADLLQYS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00170 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 157 - -
Bva13g00170 160 MobiDBLite consensus disorder prediction 1 25 - -
Bva13g00170 160 MobiDBLite consensus disorder prediction 1 52 - -
Bva13g00170 160 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Bva13g00170 160 Coils Coil 47 81 - -
Bva13g00170 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Bva13g00170 160 MobiDBLite consensus disorder prediction 26 52 - -
Bva13g00170 160 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Bva13g00170 160 Gene3D - 29 84 - -
Bva13g00170 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Bva13g00170 160 Coils Coil 89 116 - -
Bva13g00170 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 157 - -
Bva13g00170 160 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Bva13g00170 160 Pfam bZIP transcription factor 31 82 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00170 Bva-Chr13 832986 834702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00170 25 159 bZIP Transcription Factor Family AT4G34590 60.432 2.10e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva13g00170 bZIP_1 3.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00170 K25786 - gmx:100101862 240.736