Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00162 ATGGagaagatagaaaaaaaacataCGAATATACTTAAGGATTTTCTATCTTCCTCGTCATCGATCTCATCTTCGATGGCTATCCTCCTGGTCTTCTTGGCCTTTTCCTCCACCATAACCCCTGCTTTTTCAGCTCCCCAAGCTTCCACTTTCTCCCCAAAAGATAACTTCCTCATTGATTGTGGTGCAGATAAAGCCCCCACCCTCCCTGATGGTAGACAATTTAAATCAGACCAAGAAGCCAAACCATTCCTACAAGCCAATGATGACCACATAGCCTCAGCTAATGATGCCAATATTCCCTCTCCCCTTTACTCAAATGCCAGGATTTTCATTCAGGAAGCAAACTACTCCTTTCATTTGAGTCAACCAGGCTTCCATTGGGTTCGCCTTCATTTCTTCCCTTTAAAAACCGATGGTTTTGATCTTCAAAAGGCTACTTTCTCTGTCAATACTGATAAGTATGTTCTCCTTCACAACTTCAATGTTAACAACAATGACAAACCCATCCTTAAGGAATACCTTATAAATGTAACTGAACAAATCTTTACAATCTCCTTTATTCCCCTCAAGAATTCAGCTGCCTTTATCAACGCCCTTGAAGTTGTTTCAGCTCCAGATATCCTCATTGCTGACACTGGCGTCTCCCTTTTCCCCGTCGAAGAGTTGTCAGGTTTGACAGGTTATGCATTCCAACCGGTTTACCGGCTCAACAATGGAGGACCAACAATCACCTCAACAAATGACACCCTGGGAAGAACTTGGGAACCTGATGAGAATTTTCTTACATCCAAAGAATTGGGAAAGAGTGTCTCAGTGGCTACCAATGCCATCAAGTACCCCGAGGATACGCCAACAATGTCTCCTCTTATTGCTCCACAAACCGTGTATGCTTCAGCCACTGAAATGGCTGATGCCAATGTTAACACGCCAAGTTTCAATGTCTCATGGAAATTTGATGTGGACAACGCTTTTAGTTACCTCGTTAGATTGCATTTCTGTGACATTGTGAGCAAAGGGCTTAATGAACTTTACTTCAACGTCTATGTTAATGGGAAAACAGCGATTTCTAACTTGGATTTATCAGCTATCAACGGTGCATTGTCTGTCCCATATTACAAAGACATTGTGGTGAATGCTTCATTGATGTCTCAAGGACTAACAGTTCAAGTGGGTCCAGCTAAGGTAGAAAGTGGGATTGGACAAGCCATTATGAATGGTATCGAGGTGATGAAGATAAGCAATTCTGTTAACAGTTTAGACGGAGAATTTGGAGTTGATGGAAGAAAGGAGGGTGGTTCTAAGCGTGGGACAGTGGCAGCAGTTGGTTTTGCTATGATGTTTGGAGCCTTTGTGGGGCTTGGTGCTATGGTCATCAAGTGGAAAAAGAGGCCTCAAGACTGGCAAAAGAGGAACAGTTTTTCTTCATGGTTACTTCCTCTTCATGCAGGTGACTCAAGCTTCATGAGCAAGAATTCAATTGGATCTAACAAGAGTAGTTTCTACTCTTCAACTACGGGATTAGGCAGGTACTTCTCTTTAGCCGAGTTGCAGGAAGCAACAAAGAACTTTGATTCCAAGGCCATCATTGGTGTTGGTGGATTTGGTAATGTCTATTTGGGTGTCATAGATGAGGGGACTCAAGTGGCTGTCAAGAGAGGAAACCCACAATCAGAACAAGGTATCACAGAATTTCAGACTGAAATTCAGATGTTGTCAAAGCTAAGACACAGGCATTTGGTGTCCTTGATTGGATATTgtgatgaaaatgatgaaatgatTCTGGTTTATGAGTACATGTCTAATGGACCTTTCAGAGATCATATTTATGGGAAGAACTTGCCTTCTTTGAGTTGGAAACAAAGATTGGAAATCTGCATAGGAGCTGCTCGTGGGCTTCACTACCTTCACACTGGCACTGCACAAGGCATCATTCACCGTGATGTCAAGACCACCAACATTCTACTTGATGAAACCTTCACAGCCAAAGTTGCAGATTTTGGGCTTTCAAAAGATGGAGCTATTGGCGGCCAGGGCCATGTAAGTACTGCAGTGAAAGGTAGCTTTGGGTATCTGGACCCTGAGTACTTCAGGAGGCAGCAGTTGACAGAGAAGTCTGATGTGTATTCATTCGGGGTGGTGCTGCTTGAGGCACTCTGTGCAAGGCCAGCCATTAACCCTCAGTTGCCTAGAGAACAAGTAAACTTGGCAGATTGGGCTATGCAGTGGGAGAAGAAGGGCTTGCTTGACAAGATCATTGATCCTCGTCTTATTGGTTCCATAAACCCTGAATCGATGAAGAAGTTTGCTGAGGCCGCTGAGAAATGCTTGGCAGAACATGGAGTTGATAGGCCTTCAATGGGAGATGTATTGTGGAACTTGGAGTATGCTTTGCAACTTCAAGAAGCTTTCACGCAAGGAAAGACTGAGGATGAGGGAAAGTCTCCTGACACTGTAGCTGCTTCTCCAGATCCAGCTACTCCTAAAACTACCACCACAGATGACCGCCCAGTTTCTCAACCTGAAGTAAACAACAGCCCAGCACAAGTGCAAGCTATTGATGATCATTCTGGCACAGCAATGTTTGCCCAATTCACTAATCTTAATGGAAGATA 2615 0.4317 MAILLVFLAFSSTITPAFSAPQASTFSPKDNFLIDCGADKAPTLPDGRQFKSDQEAKPFLQANDDHIASANDANIPSPLYSNARIFIQEANYSFHLSQPGFHWVRLHFFPLKTDGFDLQKATFSVNTDKYVLLHNFNVNNNDKPILKEYLINVTEQIFTISFIPLKNSAAFINALEVVSAPDILIADTGVSLFPVEELSGLTGYAFQPVYRLNNGGPTITSTNDTLGRTWEPDENFLTSKELGKSVSVATNAIKYPEDTPTMSPLIAPQTVYASATEMADANVNTPSFNVSWKFDVDNAFSYLVRLHFCDIVSKGLNELYFNVYVNGKTAISNLDLSAINGALSVPYYKDIVVNASLMSQGLTVQVGPAKVESGIGQAIMNGIEVMKISNSVNSLDGEFGVDGRKEGGSKRGTVAAVGFAMMFGAFVGLGAMVIKWKKRPQDWQKRNSFSSWLLPLHAGDSSFMSKNSIGSNKSSFYSSTTGLGRYFSLAELQEATKNFDSKAIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMSNGPFRDHIYGKNLPSLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDETFTAKVADFGLSKDGAIGGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWEKKGLLDKIIDPRLIGSINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFTQGKTEDEGKSPDTVAASPDPATPKTTTTDDRPVSQPEVNNSPAQVQAIDDHSGTAMFAQFTNLNGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00162 846 Gene3D - 206 390 - -
Bva13g00162 846 Gene3D - 31 181 - -
Bva13g00162 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Bva13g00162 846 PANTHER OS07G0166700 PROTEIN 17 820 IPR045272 GO:0004714|GO:0006468
Bva13g00162 846 PANTHER BNAC03G60370D PROTEIN 17 820 - -
Bva13g00162 846 Gene3D Transferase(Phosphotransferase) domain 1 575 795 - -
Bva13g00162 846 Gene3D Phosphorylase Kinase; domain 1 460 574 - -
Bva13g00162 846 Pfam Protein tyrosine and serine/threonine kinase 503 765 IPR001245 GO:0004672|GO:0006468
Bva13g00162 846 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Bva13g00162 846 MobiDBLite consensus disorder prediction 780 832 - -
Bva13g00162 846 SUPERFAMILY Protein kinase-like (PK-like) 482 767 IPR011009 -
Bva13g00162 846 Pfam Malectin-like domain 34 388 IPR024788 -
Bva13g00162 846 CDD STKc_IRAK 505 770 - -
Bva13g00162 846 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00162 846 MobiDBLite consensus disorder prediction 799 828 - -
Bva13g00162 846 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00162 Bva-Chr13 793564 796179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00162 26 846 Receptor kinase-like Gene Family AT4G39110 69.093 0.0 1193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva13g00162 Malectin_like 2.2e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00162 - - gmx:100790759 1362.44