Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00139 ATGATGAATTCTCTTTTAGCTTATAATTTAGGAGGGGTTGAAATGAGTTGTCATCGTTGCAAAAGAGAGTTCAAAAGCTATCGAATCTTTGAGAACCATTTAAAGGCACATCAAGATGTGGCCAAGTTGCAGAGGTACAACCAAAATGGTTCAAATTCTGCCCAGATTTCCATTGACAGTACCAGTTCTAATCTGAGTCTCCTCAGCACAACTGGAAATTCTTTTGGACATCTTGGAAACAATCCTTTGGTATCTACAGCTGCCAAAAGTCTAGACATAATGTCTCCAAACCTTTCATCTGCTAGCAACAACATTGCATCATCAACACCATTGGCCCCAATTGGTTACCATAGGAATCCTGATTATTTATTCAAGGATTCCAGTATTCAGCATAAGCTTGAGATGAAGAAATTTCCTAGCATGAAGGAACCTACTATTGTaagaaatttccttttaaagGATGCAAAGAGCGCATTTCCTACATCAGGGATTATGAATGATGCCCAAGGGAAATATTTAGATAAAGGAAAGGTTGGGCAGAAAGAGTATACTCATAGCTGCTACTATTGCAACAAAGTCTTCAATGACTACCATGCTCTGGGGGGCCATCTTAGGGCACatcaagaagaaattaagatacgaagaaaccaaaattatGCAGGTCCTTCTCGCAATCCCATTGATGGAACCACTTCAAATCCCATCCTTTCTATGAATAGCTTGGATAAGACTTCCTCAACATTTCTTATAAAGGACCCCTCTCTTTCAAAAGGAATTTATTCAGAAAATAGCATTAATGGAGATCCCAACATTCAATTGACCTTGTCTCCAAATTATTCATATGCACGCAACAAGATGAAGGCATCCTCGACTTCATGTGTTAGAAGAACTCTGCCCTCTACCCTTCCCATGGATTCTCCAAGTTATATGGTTCCTATGATGAATGGTTTTAACCAAGGAATTGACAGTAACAAATTTCGTTCATCCCCTTATGACCATTCTACAAATTTAGCTTGTAAAAGGGCAGGAGAACAATGGCTACGTGTTCAAGGAGATGAAATCACGGCGAGCTCATCGAAACGGAGCAAGATCAATTTTATTCCACCAGTCTTCCATGAAACAAAGATGCCTAAAAAGAAAGGATCACTTCTTGTTAAGGATGCAAATCTGGGAAAAGACAAATCAGCTGCTTGTGATAATGCAGATGATCATGCAAGGGAGAATTGTGAAGCAAAATTGGATCTCTCACTTCACCTGTA 1259 0.3813 MSLSLDLDKGKVGQKEYTHSCYYCNKVFNDYHALGGHLRAHQEEIKIRRNQNYAGPSRNPIDGTTSNPILSMNSLDKTSSTFLIKDPSLSKGIYSENSINGDPNIQLTLSPNYSYARNKMKASSTSCVRRTLPSTLPMDSPSYMVPMMNGFNQGIDSNKFRSSPYDHSTNLACKRAGEQWLRVQGDEITASSSKRSKINFIPPVFHETKMPKKKGSLLVKDANLGKDKSAACDNADDHARENCEAKLDLSLHL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00139 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Bva13g00139 253 Pfam C2H2-type zinc finger 19 43 - -
Bva13g00139 253 SUPERFAMILY beta-beta-alpha zinc fingers 15 44 IPR036236 -
Bva13g00139 253 ProSitePatterns Zinc finger C2H2 type domain signature. 21 41 IPR013087 -
Bva13g00139 253 Gene3D Classic Zinc Finger 3 62 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g00139 zf-C2H2_6 3.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00139 - - tcc:18596489 83.1889