Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00136 ATGGCAATTGCACGAACAGGAGTATTCGTCGACGACTACTTGGAGTACGCAAACACATTACCTGCTGAGCTTCAGAGGCTTCTCAATACCATCCGGGAACTCGATGAGCGATCAcaatCTATGATAAGCCAGACCAGGCAACAGACAAAGGACTGTATGGGCTTGTCATCACATAGCTCAAAGAAAGGCAATCATCATAACAGTAGCCATAGCTATAATAACCATAACACCAATGAAGAAGACGATGCGGCAATTGagaaaatgcaaaaagaaatcgAGGCAAATCAAGATAATGCATTAAGTCTATGTACTGAGAAGGTTTTGCTGGCCAGGCAAGCATATGACTTGATAGATAGCCACGTAAAACGACTGGATGAagacttgaccaacttcgctGAAGATCTAAAACAAGAGGGAAAAATATCACCAGATGAACCAGCAATTCTCCCACCATTACCTATAGTCCCTAAAAGTGAGAAACGCAAGTACATATATGGAACACCTCAATCAAAGAGATTTGATTACAGGGATAGAGATTGGGATCGGGAGCGCGATAAGGATTTTGAGCTCATGCCCCCACCAGGAAGCCATAAAAAGGACTATGCGACTCCCTTGGATATTGATCAACCTATTGATCCAAACGAACCCACATATTGTGTTTGTCATCAgGTGTCTTATGGAGATATGATTGCGTGTGACAATGAGAATTGCGAAGGAGGCGAATGGTTCCACTATTCATGCGTTGGCCTAACACCGGAGACAAGATTCAAGGGAAAGTGGTATTGTCCAACCTGTAGAGACAAAGTCAATGACAAGTACTA 821 0.4093 MAIARTGVFVDDYLEYANTLPAELQRLLNTIRELDERSQSMISQTRQQTKDCMGLSSHSSKKGNHHNSSHSYNNHNTNEEDDAAIEKMQKEIEANQDNALSLCTEKVLLARQAYDLIDSHVKRLDEDLTNFAEDLKQEGKISPDEPAILPPLPIVPKSEKRKYIYGTPQSKRFDYRDRDWDRERDKDFELMPPPGSHKKDYATPLDIDQPIDPNEPTYCVCHQVSYGDMIACDNENCEGGEWFHYSCVGLTPETRFKGKWYCPTCRDKVNDKY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00136 273 SMART ING_2 9 131 IPR024610 -
Bva13g00136 273 Coils Coil 24 44 - -
Bva13g00136 273 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 131 IPR024610 -
Bva13g00136 273 Gene3D - 5 129 - -
Bva13g00136 273 ProSiteProfiles Zinc finger PHD-type profile. 216 268 IPR019787 -
Bva13g00136 273 PANTHER PHD FINGER PROTEIN ING2 2 267 - -
Bva13g00136 273 SUPERFAMILY FYVE/PHD zinc finger 194 269 IPR011011 -
Bva13g00136 273 SMART PHD_3 218 266 IPR001965 -
Bva13g00136 273 PANTHER INHIBITOR OF GROWTH PROTEIN 2 267 IPR028651 -
Bva13g00136 273 CDD ING_plant 19 128 - -
Bva13g00136 273 CDD PHD_ING 218 265 - -
Bva13g00136 273 Coils Coil 78 98 - -
Bva13g00136 273 MobiDBLite consensus disorder prediction 38 77 - -
Bva13g00136 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 269 IPR013083 -
Bva13g00136 273 MobiDBLite consensus disorder prediction 38 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00136 Bva-Chr13 634511 637806 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bva13g00136 ING 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00136 K11346 - zju:107435296 462.611