Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00124 ATGTCGTTTTCTTATGTGAAAAGCTTCTTCCAGAGGTTCTGCGTGGATGAGTTTCAAATGGGAAGTTATGCTCACAGCAGCTTTTTGTCTAATGATCTTCTGCCTTCTCTTGGAGCCAGAATCAACCAGGAAACCAGACTTCGAAAACACATAATTTCCCCCTTTAGTCCCCTTTATAGGGCTTGGGAGTTGTTACTGGTTTTTCTAGTCATATACTCAGCTTGGATTTGCCCATTTGAGTTTGCCTTTCTGCCTTACAAGCAAGATGCGCTTTTCATCATTGACAACATTGTCGATGGCTTCTTTGCTATTGATATCATCCTCACATTCTTTGTTGCATATCTAGATAGCCACACTTACCTTCTTGTTGATGAaccaaagaaaattgcaataaGGTACATATCAACCTGGTTCATTTTTGACGTCTGCTCAACTGCACCATTTGAGCCCATTAGCCTCCTTTTCACCAACCACAGCAGCGAGCTTTGCTTTAAACTGCTTAACATGCTCAGACTATGGCGTCTGAGAAGAGTTAGCTCTCTGTTTGCAAGaCTTGAGAAGGATATCCGCTTCAATTATTTCTGGATTAGATGCACAAAGCTTATTGCTGTAACCTTGTTTGCAGTACACTGTGCTGGATGCTTTTACTATCTGATTGCAGATAGATACCCTGATCTCGAAAATACCTGGATTGGCTCAGTGTATCCAAATTTCAAAGAAACAAGCCTTTGGAACAGTTACGTGACTGCATTATACTGGTCCATTGTCACACTTACGACTACTGGCTATGGCGATTTACACGCCGAAAACCCAAGAGAGATGCTGTTTGATATCTTCTACATGCTGTTCAACCTGGGATTAACATCATACATCATTGGAAACATGACCAACCTTGTAGTCCACTGGACCAGCCGCACCCGAAATTTCAGAGATACAGTGAGAGCAGCCTCTGAATTCGCATCAAGAAATCAAATGCCCCACCGCATACAAGATCAACTGTTGTCACACTTATGTTTGAGGTTTAAAACAGAAGGATTGAAGCAGCAAGAAACATTAAATGGTCTGCCCAAGGCAATTCGTTCAAGCATTGCATACCATCTTTTCTTTCCTGTTGTGCAGAAGGTTTACCTCTTCCATGGAGTTTCTCAAGACTTCCTTTTTCAACTGGTTTCAGAAATGGAAGCTGAGTATTTTCCACCCAGGGAAGATGTGATATTGCAAAACGAGTCTCCTACTGATCTTTACGTGCTGGTGTCAGGGGCAGTGGATTTTATTGGCCAAGTTGATGGGCAAGATCAATTTCTAGGGAAGGCCAGTACTGCAGGAGATACATTTGGAGAGACTGGGGTTTTGTACCATAGACCACAGCCTTTCACAGTTCGGACCACGGAGCTGTCTCAAATTCTAAGACTGCAGAGAGCTTCATTAATGAATGCCCTACAAGCTAATGCTGAAGAAGCACAAATCATAATGGATAACCTTTTCACGAGATTAAAGGCTCCGGAAAGAGTCCCGGCATCACCTTATGGAGCAACAAGAGAAAGCTTTTACAATGCATGCAGTAATAATTCACTTGGAGATTCGTCAATACGGGAAAGAAGGTacagaaatttcaaagatttggAGGCTAAATTGTGTAAGGAGACAAGCAATGATAATTTCATTACTAAATGTGAGAATGACCAAAGAGATCTTCAAGATCCGGAGATGGTTCAAGTTCTGCTCGAAAGAGATGCAAATGCAAAGAATCCAAATAACATAGGCTGGAAACCAAAGCTGCAAGGAAACGAGAGCATTCCTGACCTCTTTATGAGTGAAAAAAGACAGCCAAAAATCCTTAACGATGCTAGAAACGACCCAACCATATACAGAAGACAAGATGGTTGCCCCTCAAGTACTTTGAACTGTCAGAGTGGTCGCATCAAGAAGAGAGTTACAATTCACTTGCCATGTGAATGCAGAAGTACCTCAGAAAGACAGCATGGAAAGTTGATAATCCTACCAGATTCATTAGAAGAGCTGCTTAAGATTGCCGGTGACAAGTTCGGAGGCTCCAAACCTTCAAAAGTTATTAACGGAGAGAATGCAGAGATAGATGACATAAGCGTCATTCGAGATGGTGatcatctctttcttctttgcagCGATAGTCAAATTTTAGGTTATGAAGATTGCTTGTA 2180 0.4083 MSFSYVKSFFQRFCVDEFQMGSYAHSSFLSNDLLPSLGARINQETRLRKHIISPFSPLYRAWELLLVFLVIYSAWICPFEFAFLPYKQDALFIIDNIVDGFFAIDIILTFFVAYLDSHTYLLVDEPKKIAIRYISTWFIFDVCSTAPFEPISLLFTNHSSELCFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWIRCTKLIAVTLFAVHCAGCFYYLIADRYPDLENTWIGSVYPNFKETSLWNSYVTALYWSIVTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNQMPHRIQDQLLSHLCLRFKTEGLKQQETLNGLPKAIRSSIAYHLFFPVVQKVYLFHGVSQDFLFQLVSEMEAEYFPPREDVILQNESPTDLYVLVSGAVDFIGQVDGQDQFLGKASTAGDTFGETGVLYHRPQPFTVRTTELSQILRLQRASLMNALQANAEEAQIIMDNLFTRLKAPERVPASPYGATRESFYNACSNNSLGDSSIRERRYRNFKDLEAKLCKETSNDNFITKCENDQRDLQDPEMVQVLLERDANAKNPNNIGWKPKLQGNESIPDLFMSEKRQPKILNDARNDPTIYRRQDGCPSSTLNCQSGRIKKRVTIHLPCECRSTSERQHGKLIILPDSLEELLKIAGDKFGGSKPSKVINGENAEIDDISVIRDGDHLFLLCSDSQILGYEDCL 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00124 726 Gene3D Jelly Rolls 341 503 IPR014710 -
Bva13g00124 726 PANTHER POTASSIUM CHANNEL AKT1 1 718 IPR045319 GO:0005249|GO:0006813
Bva13g00124 726 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva13g00124 726 SMART cnmp_10 377 495 IPR000595 -
Bva13g00124 726 SUPERFAMILY cAMP-binding domain-like 304 498 IPR018490 -
Bva13g00124 726 Coils Coil 477 497 - -
Bva13g00124 726 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 718 - -
Bva13g00124 726 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00124 726 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00124 726 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00124 726 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00124 726 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00124 726 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g00124 726 CDD CAP_ED 377 491 IPR000595 -
Bva13g00124 726 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Bva13g00124 726 Pfam Cyclic nucleotide-binding domain 397 482 IPR000595 -
Bva13g00124 726 Pfam KHA, dimerisation domain of potassium ion channel 643 712 IPR021789 -
Bva13g00124 726 ProSiteProfiles KHA domain profile. 644 726 IPR021789 -
Bva13g00124 726 Gene3D - 60 300 - -
Bva13g00124 726 ProSiteProfiles cAMP/cGMP binding motif profile. 377 497 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00124 Bva-Chr13 571621 575519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00124 1 712 Ion Channels AT5G46240 62.604 0.0 911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00124 13 571621 575519 Bva13g00124 13 571621 575519 ECH