Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00103 ATGGGATCGAGAATTATGGGGCAATTTGgaactattttaaaagaagCCTGGAGTAAAACATTACCGGTCGCaaagtttttatgttttcttcatgTAACAGGAACATATGGGTGTCAAGTTAGTCATAGCTATGGTCCTAGCATGCTTCCCACATTGGGTTCGACTAATTACTTAATATATGAAACTATCTCAACCCGGTGCGATAATATTCGGCCAGGAGACATTGTCATCGTGCGGTCAGTTGAGAACCCTAGAAAGTACACGACAAAGCGCTTGATTGGAATGGAAGGTGATACCGTTACATATCTTGTTGATCCCAAGGAGAGTGATAAGTGCGAGACTGTTGTGATTCCAAAGGGACACATTTGGGTACAAGGAGATAACATTTACGATTCCAAtgattcaagaaaatttggcCCTGTTCCTTATGGCCTTCTTATAGGCAAGGCATTCTGGAAGATATGGCCACCTGAAGGTTTTGGATCCTTGGGCAAAAACTG 500 0.388 MGSRIMGQFGTILKEAWSKTLPVAKFLCFLHVTGTYGCQVSHSYGPSMLPTLGSTNYLIYETISTRCDNIRPGDIVIVRSVENPRKYTTKRLIGMEGDTVTYLVDPKESDKCETVVIPKGHIWVQGDNIYDSNDSRKFGPVPYGLLIGKAFWKIWPPEGFGSLGKN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00103 166 Gene3D Umud Fragment, subunit A 35 161 - -
Bva13g00103 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 2 165 - -
Bva13g00103 166 CDD S26_SPase_I 45 150 IPR019533 GO:0004252|GO:0006465
Bva13g00103 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 88 100 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva13g00103 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 117 136 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva13g00103 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva13g00103 166 SUPERFAMILY LexA/Signal peptidase 44 163 IPR036286 -
Bva13g00103 166 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 2 165 - -
Bva13g00103 166 Pfam Signal peptidase, peptidase S26 27 102 IPR019533 GO:0004252|GO:0006465
Bva13g00103 166 Pfam Signal peptidase, peptidase S26 111 155 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00103 Bva-Chr13 491671 493633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00103 48 164 MADS-box Gene Family AT1G29960 50.847 1.04e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00103 K09647 - nnu:104610480 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00103 13 491671 493633 Bva13g00103 13 491671 493633 ECH