Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00102 ATGTCACAAATGGGGTCGGGTCACATTTTCAAAGAAATCGTCCCTGCTATAGTTTCGTGTGCAGAGCCAAGCTCAGAACTTGAAGTTGAGGCTTTGAAAGCCGTCAAGAACTCCATTACCAATGACCCAAATGGTGCACTTGCTGATTGGGTTGACACCCTCCACCATTGCAACTGGTCTGGCATTGTTTGTGATCCATCTTCAAACCATGTCATTGAAATTGCTCTAGCAGGCCAGCAGCTTGAAGGGAAGATCTCACCTTTCCTGGCAAATATTTCTACACTCCAGGTTCTTGATTTAAGTTCCAACTCATTTAATGGTCTTATTCCTCCTCAGCTGAGTCTTGGCCTACGGCTTTCTGAGATTTATCTTGTTGAAAATTCTCTTTCTGGTCCAATTCCACCAGAATTAGGAAACATGAAAAATCTTAAGTATTTGGATGTGGGTAGTAACCTTCTAAATGGAAGCCTCCCTGATAGCATATTCAACTGCACTTCATTGTTGGGTATTGCTTTCAATTCTAACAATCTCGCTGGAAAAATCCCAAAAATAGGCAATCTAGATAACCTTATACAAATTGCAGGATATGGGAATAATTTCATTGGACCAATTCCTACTTCCATAGGCAACTTGGTATCTCTGCAATCTCTTGATTTTAGTGTAAACCAGTTGTCAGGAGAAATCCCCAAAGAGATTGGAAATCTGCAGAATTTAGAAATCCTTCAGTTGTTTGGAAATTCACTTTCCGGGAAAATCCCATCTGAGCTTGGTCAGTGTAAAAACCTTGTCCTACTTGCATCTTACAGCAATCAGCTTACTGGAAGCATTCCTCCTGAGCTAGGAAACTTAGTTCAATTGAAAAAACTTCGGTTGTATGATAATAAGTTATATTCCACAGTTCCATCTTCCATTTTCCAGTTGAAGTCATTAACCCATTTAGAACTCTCAGAGAATAACTTAGACGGAGAAATATCATTGGAGATTGGATCTTTGAGATCGTTACAAGTTCTTACTCTTCATCAGAATAAGTTTACTGGACAGATTCCTTCATCAGTaacaaatttgacaaatttaactTATCTGTCAATGAGCCAGAATCTCCTCTCAGGTGAACTTCCACCAAACATAGGAATGCTTCATAATTTGCAGTATCTAGTCATGCATACCAACCTCTTTCATGGAACCATCCCTCCTAGTATTACCAATTGTACTAAATTGATGAATGTAAGTTTATCTAATAATGCAATAACTGGGGAAATTCCTCGGGGGTTTTCAAGGATGCCTAATCTCACCCACCTGTCTCTTGCATCCAACAAAATGTCTGGGGAAATCCCGGATGACCTCTTCAACTGCTCAAATCTTCATACTCTAAGCTTGGGGATGAACAATTTTAGTGGATTGCTAAAACAAGGTATCCAAAACCTGTTTAATCTCCAGATTCTGCAGCTGATTTCCAATTCATTCATAGGGCCAATTCCACCTGAGATTGGGAACTTAAATCAACTCCACACCTTATCACTTTCTGAAAATAGGTTTTCAGGTCATATTCCACCGGAACTGTCCAAACCTCCCCTCCTTCAAGGGCTCTTCCTGCATGATAATGTGTTAGAAGGTGCAATACCTGACAATCTTTCTGAAATAAAACAACTGACTGAACTTGATCTGTCTCAGAACAAGTTAGTTGGTCAAATTCCAAGTTCTTTCTCAAAGCTACAGATGCTTTCATCCTTAAACCTCCATGGAAACAACCTTAGTGGGCTCATTCCAATAAGCATGGGGCAGCTTAAACAGCTTTTAGTTTTGGATCTTTCTCACAACAATCTCACAGGATCAATTCCAGGAGACATCATTGCACACTTCAAAGGCATGCAGCTATATCTTGATTTGTCTTACAACCACTTGGTTGGAAGTATTCCAAATGAGTTGGGTGCGTTGGAAATGGTACAAGCAATTGATATTTCAAACAATAACCTTTCTGGTGTAATTCCTAAGACACTTGCAGGATGCAGAAATCTATTCAGTCTTGATCTTTCAGGAAACAATATTTCTGGTCCTATTCCTGCAGAAGCTTTTGCTCACATGGACTTGCTTGAAAGCTTAAACCTTTCAAGGAATCATTTAAGTGGTAAAATCCCTGAAAGTTTGGCAAAGATTGAGAGTCTTAATTCCCTAGACCTTTCTCAGAATAACTTGAAGGGAATTATCCCTGAAGGCTTTGCCAATCTTTCCAACTTGAGGCATCTCAATCTATCTTTCAATCAACTTGAAGGTCGTGTGCCAGAGACTGGAATATTTGAACACATCAATGCATCTGATTTGATGGGAAACCCAGCTCTTTGTGGAACGAAATTCTTAGGGTCATGCGGGGTACCGGGTTCTCATGCACTATCCAAGAAGAGCATAGCAATTATTGCTTCACTTGGATCTGTTGCTATACTGTTATTTGTGgtgtttgtgattttaattCTCAAACACCGCACCAAATTGCATAAATCCACAAATGAGGATCCTGAACGGGTAGGTCCAGTACGCACTTCGGCACTGGCCCTTAAAAGATTTGATAAAAAGGAATTAGAGAATGCCACTGTTTTTTTCAGCAAAGATAACATCATTGGTGCTAGCAGCTTGAGCACTGTGTACAAGGGTAGATTAGAAGATGGCCAGATTGTAgccataaaaaatttgaatttgcgCCAGTTCTCCGCAGAATCTGACAAGGCCTTTAACAGAGAAGTTGGGACTTTAAGCCAGCTGAAACATAGGAATTTGGTCAAGGTACTGGGTTATGCTTGGGagagtgaaaaaataaaggctTTAGTTCTGCAGTACATGGAGAATGGGAACTTGGAGAGCGTCATACATGACAGAGAAGTGGATCAGTCTAGATGGACATTATCTGAAAGAATCAATGTTTTCGTTTCTATTGCTAGCGGACTGGATTACTTGCACTCCGGTTATGATTTTCCCATTGTTCACTGTGATTTAAAGCCTTCTAATATCTTGTTGGATGGAGATTCTGAGGCCCATGTCAGTGATTTTGGGACAGCTCGAATGCTTGGTCTTCATCTGCAGGATGGTGGCCTTTCCTTATCAGAAGCTTTAGAAGGCACTATTGGCTATATGGCGCCAGAGCTCGCCTACATGAGAAAAGTAACTACTAAAGTTGACGTATTCGGCTTTGGTATAATAATGATGGAGTTTCTAACAAGAAGAAGGCCAACAGCACTCACAGAAGAGGATGGATTACCAATAAGTCTGCGTGAAATTGTGGAGAAAGCTCTTTCAGATGGGACACGAGAGATTGTTAAAGTTGTGGACCCGCAGTTAACTCGGAATGTTGGTAAGGAGCACCAAGTTTTGGTAGAGCTACTTAGATTATCCTTGTGCTGCACACTCCCAGATCCTGAGGATCGACCTGATATGAAAGTGGTGCTGTCTGCCCTCATGAAGTTGAAATA 3458 0.3997 MSQMGSGHIFKEIVPAIVSCAEPSSELEVEALKAVKNSITNDPNGALADWVDTLHHCNWSGIVCDPSSNHVIEIALAGQQLEGKISPFLANISTLQVLDLSSNSFNGLIPPQLSLGLRLSEIYLVENSLSGPIPPELGNMKNLKYLDVGSNLLNGSLPDSIFNCTSLLGIAFNSNNLAGKIPKIGNLDNLIQIAGYGNNFIGPIPTSIGNLVSLQSLDFSVNQLSGEIPKEIGNLQNLEILQLFGNSLSGKIPSELGQCKNLVLLASYSNQLTGSIPPELGNLVQLKKLRLYDNKLYSTVPSSIFQLKSLTHLELSENNLDGEISLEIGSLRSLQVLTLHQNKFTGQIPSSVTNLTNLTYLSMSQNLLSGELPPNIGMLHNLQYLVMHTNLFHGTIPPSITNCTKLMNVSLSNNAITGEIPRGFSRMPNLTHLSLASNKMSGEIPDDLFNCSNLHTLSLGMNNFSGLLKQGIQNLFNLQILQLISNSFIGPIPPEIGNLNQLHTLSLSENRFSGHIPPELSKPPLLQGLFLHDNVLEGAIPDNLSEIKQLTELDLSQNKLVGQIPSSFSKLQMLSSLNLHGNNLSGLIPISMGQLKQLLVLDLSHNNLTGSIPGDIIAHFKGMQLYLDLSYNHLVGSIPNELGALEMVQAIDISNNNLSGVIPKTLAGCRNLFSLDLSGNNISGPIPAEAFAHMDLLESLNLSRNHLSGKIPESLAKIESLNSLDLSQNNLKGIIPEGFANLSNLRHLNLSFNQLEGRVPETGIFEHINASDLMGNPALCGTKFLGSCGVPGSHALSKKSIAIIASLGSVAILLFVVFVILILKHRTKLHKSTNEDPERVGPVRTSALALKRFDKKELENATVFFSKDNIIGASSLSTVYKGRLEDGQIVAIKNLNLRQFSAESDKAFNREVGTLSQLKHRNLVKVLGYAWESEKIKALVLQYMENGNLESVIHDREVDQSRWTLSERINVFVSIASGLDYLHSGYDFPIVHCDLKPSNILLDGDSEAHVSDFGTARMLGLHLQDGGLSLSEALEGTIGYMAPELAYMRKVTTKVDVFGFGIIMMEFLTRRRPTALTEEDGLPISLREIVEKALSDGTREIVKVVDPQLTRNVGKEHQVLVELLRLSLCCTLPDPEDRPDMKVVLSALMKLK 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00102 1152 PRINTS Leucine-rich repeat signature 718 731 - -
Bva13g00102 1152 PRINTS Leucine-rich repeat signature 598 611 - -
Bva13g00102 1152 SUPERFAMILY RNI-like 197 487 - -
Bva13g00102 1152 Gene3D Phosphorylase Kinase; domain 1 826 943 - -
Bva13g00102 1152 Pfam Leucine Rich Repeat 744 761 IPR001611 GO:0005515
Bva13g00102 1152 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 362 1150 - -
Bva13g00102 1152 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 13 294 - -
Bva13g00102 1152 SUPERFAMILY L domain-like 521 783 - -
Bva13g00102 1152 Gene3D Ribonuclease Inhibitor 267 410 IPR032675 -
Bva13g00102 1152 Gene3D Transferase(Phosphotransferase) domain 1 944 1152 - -
Bva13g00102 1152 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Bva13g00102 1152 Pfam Protein kinase domain 866 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00102 1152 SUPERFAMILY Protein kinase-like (PK-like) 846 1148 IPR011009 -
Bva13g00102 1152 Gene3D Ribonuclease Inhibitor 517 622 IPR032675 -
Bva13g00102 1152 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Bva13g00102 1152 CDD STKc_IRAK 871 1151 - -
Bva13g00102 1152 ProSiteProfiles Protein kinase domain profile. 865 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00102 1152 SUPERFAMILY L domain-like 54 265 - -
Bva13g00102 1152 ProSitePatterns Serine/Threonine protein kinases active-site signature. 990 1002 IPR008271 GO:0004672|GO:0006468
Bva13g00102 1152 Gene3D Ribonuclease Inhibitor 411 516 IPR032675 -
Bva13g00102 1152 SMART LRR_sd22_2 211 237 - -
Bva13g00102 1152 SMART LRR_sd22_2 140 172 - -
Bva13g00102 1152 SMART LRR_sd22_2 742 770 - -
Bva13g00102 1152 SMART LRR_sd22_2 547 576 - -
Bva13g00102 1152 SMART LRR_sd22_2 355 381 - -
Bva13g00102 1152 SMART serkin_6 865 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00102 1152 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 362 1150 - -
Bva13g00102 1152 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 294 - -
Bva13g00102 1152 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 289 366 - -
Bva13g00102 1152 SMART LRR_typ_2 355 379 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 140 164 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 283 307 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 694 717 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 427 451 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 92 116 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 645 668 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 595 619 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 571 594 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 499 523 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 331 354 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 742 767 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 669 693 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 211 234 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 235 259 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 718 741 IPR003591 -
Bva13g00102 1152 SMART LRR_typ_2 547 570 IPR003591 -
Bva13g00102 1152 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 289 366 - -
Bva13g00102 1152 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Bva13g00102 1152 Pfam Leucine rich repeat 649 707 IPR001611 GO:0005515
Bva13g00102 1152 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Bva13g00102 1152 Pfam Leucine rich repeat 381 439 IPR001611 GO:0005515
Bva13g00102 1152 Gene3D Ribonuclease Inhibitor 184 266 IPR032675 -
Bva13g00102 1152 Gene3D Ribonuclease Inhibitor 623 794 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00102 Bva-Chr13 477543 481775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00102 18 1152 Receptor kinase-like Gene Family AT5G46330 55.031 0.0 1149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva13g00102 Pkinase 3.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00102 K13420 - gmx:100817960 1591.63