Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00098 ATGGCTGCTTCCACAATGGCTTTATCTTCTCCCTCATTTGCTGGGCAGGCTGTCAAACTTGCCCCATCAGTCCCTGAGGTTGGCCGGGTCTCCATGAGAAAAACCGTCACCAGGAATGTCCCATCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGTCCATTATCCGGTGAGCCTCCGTCCTACTTGACCGGTGAATTCCCTGGCGACTATGGTTGGGACACTGCTGGACTTTCCGCTGACCCAGAGACCTTCGCCAGGAACCGTGAGCTAGAAGTTATCCACAGCAGATGGGCCATGCTTGGTGCTTTAGGTTGCGTCTTCCCCGAGCTCTTGGCCCGTAACGGGGTTAAGTTCGGTGAGGCCGTGTGGTTCAAGGCCGGATCCCAAATCTTCAGTGAGGGTGGACTCGACTACTTGGGCAACCCGAGTTTGATCCATGCCCAAAGCATCCTTGCCATCTGGGCCTCTCAAGTTGTACTGATGGGTGCCGTCGAGGGTTACCGTATTGCCGGTGGGCCTCTGGGTGAGGTGACTGACCCACTCTACCCAGGTGGTAGCTTCGACCCGCTGGGCCTTGCCGACGACCCAGAAGCCTTTGCTGAGCTGAAGGTTAAGGAACTCAAGAACGGTAGATTGGCCATGTTCTCCATGTTCGGTTTCTTTGTTCAGGCTATTGTGACAGGAAAGGGACCATTGGAGAACCTTGCAGATCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCATATGCCACAAACTTTGTCCCTGGAAAGTG 788 0.5495 MAASTMALSSPSFAGQAVKLAPSVPEVGRVSMRKTVTRNVPSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00098 262 Pfam Chlorophyll A-B binding protein 62 228 IPR022796 -
Bva13g00098 262 SUPERFAMILY Chlorophyll a-b binding protein 45 259 - -
Bva13g00098 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 262 IPR001344 GO:0009765|GO:0016020
Bva13g00098 262 Gene3D Chlorophyll a/b binding protein domain 53 255 - -
Bva13g00098 262 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00098 Bva-Chr13 467420 476887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00098 1 262 Chloroplast and Mitochondria Gene Families AT1G29930 88.764 6.25e-173 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00098 K08912 - gmx:100805310 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00098 13 467420 476887 Bva13g00098 13 467420 476887 ECH