Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00082 ATGGCTTTTCAGACTCTCAGTTACGTGAGATATATCATTGGGAAGGAACCATTCCTGCTTCGAAGAGACCCCATAAATACAATTCGGCCAAAGCTAGACTTTTTGCTGTCTAAAGGTGCTTCGTGTTCTGAAGTTGTTGACATAGTTACCCCGAGTCCAAGATACTTGAAAAGAAGCTTAGTGAACCATATAATCCCtagttataattttgtaaaaaggTTCCTCCATCATGACAAGAGGACCATTACAGCTATAACTCGCTGCAGCggcattattttttatgatgatatGGTACTTAATGTCAAGCTCTTGCTTGACAATGGGGTGCCTGTGTCGAGCATTGCTAGATTTCTTCATACATGGCCTAGGTTATTCAACCTAACAAAAGATGAGTCTGCGGAAGCAAAGGAATTGGGACATGATCCTTTAAAGTCAACTTTCATTCCAGCATTATATGCTACGAAGGCCCTAAGCAAATGGCCGTGGGAAAGGAAGGTTGATGTGCACAAGAGTTTTAATGAAGAATGCTGGGATTATTCTACCCTTTTATATTCCTG 557 0.3896 MAFQTLSYVRYIIGKEPFLLRRDPINTIRPKLDFLLSKGASCSEVVDIVTPSPRYLKRSLVNHIIPSYNFVKRFLHHDKRTITAITRCSGIIFYDDMVLNVKLLLDNGVPVSSIARFLHTWPRLFNLTKDESAEAKELGHDPLKSTFIPALYATKALSKWPWERKVDVHKSFNEECWDYSTLLYS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00082 185 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 8 172 - -
Bva13g00082 185 PANTHER CGI-12 PROTEIN-RELATED 8 172 IPR003690 GO:0003690|GO:0006355
Bva13g00082 185 Pfam mTERF 9 170 IPR003690 GO:0003690|GO:0006355
Bva13g00082 185 Gene3D Transcription termination factor 3, mitochondrial 5 142 IPR038538 -
Bva13g00082 185 SMART mt_12 10 41 IPR003690 GO:0003690|GO:0006355
Bva13g00082 185 SMART mt_12 46 77 IPR003690 GO:0003690|GO:0006355
Bva13g00082 185 SMART mt_12 82 110 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00082 Bva-Chr13 380043 381580 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva13g00082 mTERF 2.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00082 K15032 - vvi:100256384 125.946