Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00075 ATGGCCGTTCCGTTGCTTTCGAAGAAGATAGTGAAGAAGCGGGTCAAGAAGTTCAAGCGGCCCCAGAGTGACCGCAAGATCTCTGTAAAGACAAACTGGCGCAGACCCAAAGGTATTGATTCCCGTGTCAGGAGAAAGTTCAAGGGATGCACCTTGATGCCAAACATTGGTTATGGTTCGGATAAAAAAACTCGTCACTATCTCCCGAATGGTTTTAAGAAATTTGTTGTCCACAGTGTCAAGGAGCTGGAATTGCTGATGATGCACAACAGGACATACTGTGCTGAGATTGCACATAATGTATCGACtaggaagagaaaggaaattgtCGAGAGAGCAGCCCAGCTTGATGTTGTTGTGACAAACAAAACTGCCAGATTGCGCAGCCAGGAGGATGAGTG 401 0.4464 MAVPLLSKKIVKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHSVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKTARLRSQEDE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00075 133 CDD Ribosomal_L32_L32e 22 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Bva13g00075 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Bva13g00075 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Bva13g00075 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
Bva13g00075 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Bva13g00075 133 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00075 Bva-Chr13 344712 347118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00075 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.714 7.47e-85 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00075 K02912 - gmx:100787561 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00075 13 344712 347118 Bva13g00075 13 344712 347118 ECH