Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00071 ATGGTAGCTTTCAGAGGAATATCCGGTAGCTTATATCAATGCTTCTCTCGCAGAAAGCACTTCGATTCTCTTTCGCAATGTCTTTTCCTCCGAGGACTGGCTTCCAAGATTTTTGTTAAAcATTTAGCATTTTCTATTACAGAAGAGAAGTTAGCCGAAGCTTTTTCACAATATGGTGAAGTCATTAAAGCTGATGTAGTAATGAATAAAGCTAAAACAAGATGCAAAGGTTTTGGATTCGTGACCTTTGCTGAAGAGGAAGAAGCTCATAAGGCATGTATGGACATGAATGGAAAGACATTATTAGGACGTGTGATATATGTGGACATGGAGCCAGGTAAACGTACGAGTCGAGATAGAACTTCTCCTAAGCAGGCATCTGATGATTG 389 0.3933 MVAFRGISGSLYQCFSRRKHFDSLSQCLFLRGLASKIFVKHLAFSITEEKLAEAFSQYGEVIKADVVMNKAKTRCKGFGFVTFAEEEEAHKACMDMNGKTLLGRVIYVDMEPGKRTSRDRTSPKQASDD 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00071 129 SMART rrm1_1 36 109 IPR000504 GO:0003723
Bva13g00071 129 PANTHER RNA RECOGNITION MOTIF 13 113 - -
Bva13g00071 129 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 113 IPR000504 GO:0003723
Bva13g00071 129 SUPERFAMILY RNA-binding domain, RBD 36 120 IPR035979 GO:0003676
Bva13g00071 129 PANTHER TRANSFORMER-2-RELATED 13 113 - -
Bva13g00071 129 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 106 IPR000504 GO:0003723
Bva13g00071 129 Gene3D - 29 129 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00071 Bva-Chr13 331754 333246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00071 18 108 Eukaryotic Initiation Factors Gene Family AT1G22760 34.066 1.91e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00071 - K13195 gmx:100527061 122.864