Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00061 ATGCCAGGGAACAATTATAACACTAGTCCAGCCTCGCCCAGATCTAGATTGGAAAGGCTTCTGAGGGAAAGAGAGCTAAGGAAATCCAGCAGGTCTTCTCAGTCGACTGAGGAGCTAAGAGATGGTAACAAAGAGGCAGAAAAATTGTACAACGATTCCCATATTAGTCATGAGAATGAAATTTGGCCTCCCAATGAGGAAGATGTCTTGGATAGAGTTGCAGCTGAAAGGTTTCCCTCAGATGAACGGCCATCTAAACAACGTTTATTGGTGGTAGCCAACAGGTTGCCTGTCTCTGCTGTCAGACAGGGTGTGGATTCATGGCAGCTAGAGATTAGTGTAGGGGGGCTAGTCACTGCACTTTTAGGTATAAAGGAGTTTGACACCAGGTGGATTGGGTGGGCTGGTGTCAATGTGACTGATGAGGTTGGACAGAGAACACTAACTAAAGCTTTGGCTGAGAAGAAATGCATCCCCGTATTTCTTGATGAGGAGATAGTTCATCAGTACTACAATGGTTACTGCAACAATATCTTATGGCCTCTTTTCCATTACCTTGCTCTTCCACAAGAGGACCGCCTTGCCACCACCCGCAGTTTCCAATCTCAGTTTGATGCATATAAGAAAGCAAATCAATTGTTTGCTGACGTGGTAAACAAGCATTATGAGGAAGGAGATGTCGTTTGGTGCCATGACTACCATCTGATGTTTCTTCCAAAATGTTTAAAAGAACataataacaaaatgaaaGTTGGCTGGTTCCTCCACACaccttttccttcttcagaAATTCATAGGACATTGCCATCCAGATCAGAACTGCTGAGATCTGTACTTACCGCTGACTTGGTGGGATTCCATACTTACGATTATGCCAGGCATTTTGTTAGTGCATGTACTCGTATCCTTGGGCTTGAGGGTACACCTGAAGGAGTGGAGGATCAAGGAAAGCTAACTCGAGTGGCTGCGTTTCCTATAGGGATTGACTCTGAACGATTTATTCGGGCCCTTGAACTCCCCCAAGTCCAGGATCACAtgaaagaattgaaagaaagatttgCAGGCCGAAAGGTAATGTTGGGCGTTGATCGTCTTGATATGATAAAAGGAATTCCCCAGAAGATACTGgcatttgaaaaatttcttGAGGAGAATCCAGATTGGCGTGATAAAGTTGTCTTGCTACAAATTGCTGTACCTACGAGGACAGACGTTCCAGAATATCAAAAGCTTACAAGCCAGGTGCATGAGATTGTCGGACGCATTAATGGAAGATTTGGAACACTGACTGCTGTTCCGATTCATCATTTGGATAGGTCGCTTGATTTCCATGCCTTATGTGCACTATATGCCGTTACTGATGTGGCGCTAGTTACATCTTTAAGGGATGGAATGAATCTTGTCAGTTATGAATTTGTTGCATGCCAAGCTCGTAGGAAGGGGGTTCTCATTCTAAGTgagTTTGCAGGTGCAGCCCAGTCTCTTGGTGCCGGCGCTATCTTGGTAAATCCATGGAATATTACAGAGATTGCTGCTTCGATTGGCTATGCTTTGAATATGCCAGCTGACGAAAGAGAAAAACGGCATCAGTTTAACTTCATGCATGTCACATCTCACACATCTCAAGAGTGGGCTGCAACTTTCATGAGTGAACTGAATGACACCATTGTTGAAGCTCAGCTTAGGACAAGCCAAGTTCCACCATTACTTCCCACAGAAGCTGCTGTTGATCGTTATTCAAAATCCAATAACCGCTTAATTATACTGGGTTTCAATGCCACTTTAACTGAACCAGTTGATGCGCTAGGAAGGGGAGGTCAAATTAGAGAAATGGAGCTTAAATTGCATCCAAATGTAAGAGAAACTTTAAAGAAGTTATCTGATGATCCCGAGACAACAATTATTGTTCTGAGTGGAAGTGAACGAAGCATCCTGGACAAAAACTTTGGTGAATTCAATATGTGGTTGGCAGCAGAAAATGGGATGTTTTTACGTCTTACCACAGGAGAATGGATGACAACGATGCccgaaaatttaaatatggatTGGATTGATAGTGTGAAGCATGTTTTTGAGTACTTTACTGAAAGAACACCTCGATCTCATTTTGATCTTCGAGAGATTTCGATTGTATGGAATTACAAGTATGCAGACGCAATCTTAGATGTTGAGTTTGGAAGGATTCAAGCAAGGGATCTGTTGCAGCATCTTTGGACAGGACCCATATCAAATGCATCCCTTGATGTCGTCCAGGGTGCTCGATCTGTTGAGGTTCGGGCAGTTGGTATTTCAAAGGGAGCAGCTATTGATCGTATCTTGGGAGAGATAGTTCATAACAAAGGGATGAAGGAACCAATTGATTATGTGCTATGCATTGGGCATTTTCTAGCCAAGGATGAAGATGTGTACAAATTTTTTGAGCCAGAGCTTCCCTCCGAATCATCACCATCAACAAGAGCTACGCTATCTAATTCCTATCGGCCATctctatcaaaattttctgcCAGTAGAAGTGGTTCTAAGGCAGCTCAACTCAGGAAGCAACGTTCCCAGTCAACTATAGGGAGGAGAGGAATTGATCCTGGAAGCGGAGTTCCTCGGCTGCCAACATATCGTGACAGAATATCACCGCATGAAGGTTCTTCAGTACTGGATCTTAAAGGAGAAAATTACTTCTCTTGTGCTGTTGCACGGAAAAGATCAAATGCACGATATCTGCTTAAATCATCGGATGACGTTGTCAATCTCTTAAAGGAACTGGCAAACCATTCAACATCACCATG 2783 0.4197 MPGNNYNTSPASPRSRLERLLRERELRKSSRSSQSTEELRDGNKEAEKLYNDSHISHENEIWPPNEEDVLDRVAAERFPSDERPSKQRLLVVANRLPVSAVRQGVDSWQLEISVGGLVTALLGIKEFDTRWIGWAGVNVTDEVGQRTLTKALAEKKCIPVFLDEEIVHQYYNGYCNNILWPLFHYLALPQEDRLATTRSFQSQFDAYKKANQLFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNNKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLTADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSERFIRALELPQVQDHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQARRKGVLILSEFAGAAQSLGAGAILVNPWNITEIAASIGYALNMPADEREKRHQFNFMHVTSHTSQEWAATFMSELNDTIVEAQLRTSQVPPLLPTEAAVDRYSKSNNRLIILGFNATLTEPVDALGRGGQIREMELKLHPNVRETLKKLSDDPETTIIVLSGSERSILDKNFGEFNMWLAAENGMFLRLTTGEWMTTMPENLNMDWIDSVKHVFEYFTERTPRSHFDLREISIVWNYKYADVEFGRIQARDLLQHLWTGPISNASLDVVQGARSVEVRAVGISKGAAIDRILGEIVHNKGMKEPIDYVLCIGHFLAKDEDVYKFFEPELPSESSPSTRATLSNSYRPSLSKFSASRSGSKAAQLRKQRSQSTIGRRGIDPGSGVPRLPTYRDRISPHEGSSVLDLKGENYFSCAVARKRSNARYLLKSSDDVVNLLKELANHSTSP 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00061 923 Pfam Trehalose-phosphatase 610 830 IPR003337 GO:0003824|GO:0005992
Bva13g00061 923 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 88 553 IPR012766 GO:0003825|GO:0005992
Bva13g00061 923 Pfam Glycosyltransferase family 20 88 553 IPR001830 GO:0003824|GO:0005992
Bva13g00061 923 CDD GT20_TPS 88 553 IPR001830 GO:0003824|GO:0005992
Bva13g00061 923 MobiDBLite consensus disorder prediction 828 869 - -
Bva13g00061 923 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 65 917 IPR001830 GO:0003824|GO:0005992
Bva13g00061 923 Gene3D - 611 771 IPR023214 -
Bva13g00061 923 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 65 917 - -
Bva13g00061 923 Gene3D Glycogen Phosphorylase B; 335 537 - -
Bva13g00061 923 Gene3D - 677 757 - -
Bva13g00061 923 SUPERFAMILY HAD-like 585 917 IPR036412 -
Bva13g00061 923 MobiDBLite consensus disorder prediction 24 61 - -
Bva13g00061 923 MobiDBLite consensus disorder prediction 828 853 - -
Bva13g00061 923 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 87 556 - -
Bva13g00061 923 CDD HAD_TPP 586 805 - -
Bva13g00061 923 Gene3D Glycogen Phosphorylase B; 80 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00061 Bva-Chr13 283790 294575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00061 1 923 Trehalose Biosynthesis Gene Families AT1G78580 73.536 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00061 K16055 - mnt:21398701 1514.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00061 13 283790 294575 Bva13g00061 13 283790 294575 ECH