Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00056 ATGGAATCAAAATACCCTCCGAGGTTTACTCTGGGGAAGCAGTCATCCCTGGCCCCAGAACGCCACAACGAAGAATTGGAGAAGCTCCGTGCAGAGGAAGAAGACGCTGAAGCTGAAGATATTGATCCTGGAGTCAGGTTGATGTATTTGGCCAATGAAGGTGATCTGGATGGGATTTGCGAACTATTGGATTCCGGTATTAATGCGAATTACACGGACATCGATGGTCGAACTGCTCTTCATGTTGCAGCTTGTCAGGGTTTAACTGATGCGGTTGCTTTGTTGCTTGAGAAAGGGGCTCAAGTGGACCCAAAAGATCGCTGGGGGAGCACGCCTCTGGCAGATgctatatattataagaacAATGATGTCATTAAACAATTAGAGACGCATGGAGCAAAGCCTTTGATGGCTGCCCCCATGCATGTTAACCGTGCACGTGAAGTTCCAGAGTATGAAATTGATCCTAAAGAACTTGATTTTACCAACAGTGTGGAGATAACAAAGGGAACTTTCTGTAGTGCATTATGGCGTGGAACAGAGGTTGCTGTGAAAAAGCTAGGAGATGATGTGATTACTGATGAAGAGAAAGTGAAGGCATTTAGAGATGAGCTTGCATTATTTCAGAAGATTCGACATCCAAATGTAGTCCAGTTTCTGGGTGCTGTGACTCAGAGTAGTCCAATGATGATTGTCACAGAATATCTTCCCAAGGGAGATCTTTGTGCTTTTTTGAAGAGGAAAGGAGCATTGAAACCAACAACCGCCGTGAGATTTGCTCTTGATATTGCTAGGGGAATGGGTTATTTGCATGAGAATAAACCATCACCAATTATTCACCGTGATCTTGAGCCTTCTAATATATTGCGGGATGATTCGGGCCACCTAAAAGTTGCAGACTTTGGGGTTAGCAAGTTGATGGCAGTTAAAGAAAACAGACCTCTAACTTGCCAAGAAACTTCTGGCCGCTATGTGGCTCCGGAGGTTTTTAAACAAGAAGAATATGACACCAAAGTGGATGTTTTCTCATTTGCACTAATCCTGCAAGAGATGATTGAAGGCTGCCCACCATTTTCTGCAAAGCAAGAAGCTGAGGTTTCTAAGCTATATGCTGCAAAGGAGCGTCCACCTTTTAGAGCTCCAGCCAAGCGTTATGGCCATGGATGGAGAGAGTTGATTGAGGTGTGCTGGAATGAGAATCCGGCAAAGAGGCCAACGTTTAGGCAAATAATAACGAGACTGGAATACATATACAACACCCTTGGTCATAAAAGAAGTTGGAAGGTTAGACCATTGAAATGCTTTCAAAATCTGGAAGCCATGTTGAGGAGAGATAATTCAGATGTTGGTTCGTCTCGATCTACGCGCAGCAGTATATG 1379 0.438 MESKYPPRFTLGKQSSLAPERHNEELEKLRAEEEDAEAEDIDPGVRLMYLANEGDLDGICELLDSGINANYTDIDGRTALHVAACQGLTDAVALLLEKGAQVDPKDRWGSTPLADAIYYKNNDVIKQLETHGAKPLMAAPMHVNRAREVPEYEIDPKELDFTNSVEITKGTFCSALWRGTEVAVKKLGDDVITDEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLCAFLKRKGALKPTTAVRFALDIARGMGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLMAVKENRPLTCQETSGRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFSAKQEAEVSKLYAAKERPPFRAPAKRYGHGWRELIEVCWNENPAKRPTFRQIITRLEYIYNTLGHKRSWKVRPLKCFQNLEAMLRRDNSDVGSSRSTRSSI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00056 459 MobiDBLite consensus disorder prediction 1 37 - -
Bva13g00056 459 ProSiteProfiles Ankyrin repeat region circular profile. 75 107 - -
Bva13g00056 459 PIRSF ILK 2 437 - -
Bva13g00056 459 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 444 - -
Bva13g00056 459 Gene3D Transferase(Phosphotransferase) domain 1 237 450 - -
Bva13g00056 459 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Bva13g00056 459 Gene3D Phosphorylase Kinase; domain 1 153 236 - -
Bva13g00056 459 SUPERFAMILY Ankyrin repeat 30 136 IPR036770 -
Bva13g00056 459 Gene3D - 12 151 IPR036770 -
Bva13g00056 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 444 - -
Bva13g00056 459 Pfam Ankyrin repeats (3 copies) 47 135 IPR002110 GO:0005515
Bva13g00056 459 SUPERFAMILY Protein kinase-like (PK-like) 167 417 IPR011009 -
Bva13g00056 459 Coils Coil 19 39 - -
Bva13g00056 459 Pfam Protein tyrosine and serine/threonine kinase 177 414 IPR001245 GO:0004672|GO:0006468
Bva13g00056 459 SMART ANK_2a 108 137 IPR002110 GO:0005515
Bva13g00056 459 SMART ANK_2a 75 106 IPR002110 GO:0005515
Bva13g00056 459 SMART ANK_2a 42 71 IPR002110 GO:0005515
Bva13g00056 459 ProSiteProfiles Protein kinase domain profile. 161 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00056 459 CDD STKc_MAP3K-like 167 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00056 Bva-Chr13 249198 254074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00056 1 435 MAP Kinase Kinase Kinase AT4G18950 69.725 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Bva13g00056 PK_Tyr_Ser-Thr 1.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00056 - - gmx:100790126 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00056 13 249198 254074 Bva13g00056 13 249198 254074 ECH