Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00037 ATGGGAGCAACAACTGATGGAAGCCGTGGCCGAAGAAAGTCATCATCCAGAGGCCCCCATAAGTTTGTCGGAGTCCGGCAACGCCCCTCGGGGAGATGGGTTGCAGAGATTAAGGACTCTCTTCAGGAGGTTAGGCTCTGGCTTGGAACATTTGACACTGCAGAGGATGCAGCTTGTGCCTATGACACTGCTGCTCGAGCTTTGCGCGGCCCCACTGCTCGTACCAACTTCGATTTGCCGGAGCCTGCAGCCTCCGGCAGTGGGGGTAAGCATGGTGGTCGCTCACACTACATGCCAGATAGGATTGAGCTTTTTTCATTTGAGGATGCGTGTGAGCCAGGAGCCGATGCTGATGGCCTTCTTGGTGCTCTTAAGGCCACACTGTTTGATGAAAGTGGTTTCAATTTTCCCtcacctctttctctttcatctcGTAATGTTTCAAGTTCAACTTTCGATCATTCAGggaataataagaaatatttatcatcaaCAGCTGCTGCTTTCGCCCATATGGCTGGAACCACAAACCCTACACTGGATTTTACAAGCTTTTCATCAAACACTTCTGCTAAGAGTACAATGCTTATATCGGATCATGATTATGGAGATGCCATAGCGGGCAATGCTGGACTGAAttatcatcaacttaaccaacccATGCCCACACCAGGCATGAATTGGTCCAATGAAATGGCTCATGAGTTGTCTTGGCCTCCACAGGTGAGCCCGGTTACTCAAGATAACTTGTTTTCCTCCTCAAGTGCAGGAACATCTACATGGCCTTTCTCTGAGTCTACTAGTAATATTGGTATGATATATTCAGATCAATTGGCATCAACTAATACTAGTAAGAGTGGCAAAGTGAATATGACAAGCATGCAATTGCCACAAATTGGTGCAGTATCTGAAGGGTTTTGGGTACCTGAGCAGCAACAATTTGTGCTCTATGAGAATAATAGATG 965 0.4425 MGATTDGSRGRRKSSSRGPHKFVGVRQRPSGRWVAEIKDSLQEVRLWLGTFDTAEDAACAYDTAARALRGPTARTNFDLPEPAASGSGGKHGGRSHYMPDRIELFSFEDACEPGADADGLLGALKATLFDESGFNFPSPLSLSSRNVSSSTFDHSGNNKKYLSSTAAAFAHMAGTTNPTLDFTSFSSNTSAKSTMLISDHDYGDAIAGNAGLNYHQLNQPMPTPGMNWSNEMAHELSWPPQVSPVTQDNLFSSSSAGTSTWPFSESTSNIGMIYSDQLASTNTSKSGKVNMTSMQLPQIGAVSEGFWVPEQQQFVLYENNR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00037 321 MobiDBLite consensus disorder prediction 1 24 - -
Bva13g00037 321 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Bva13g00037 321 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 319 - -
Bva13g00037 321 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Bva13g00037 321 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 2 319 - -
Bva13g00037 321 CDD AP2 21 78 IPR001471 GO:0003700|GO:0006355
Bva13g00037 321 SUPERFAMILY DNA-binding domain 21 78 IPR016177 GO:0003677
Bva13g00037 321 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Bva13g00037 321 MobiDBLite consensus disorder prediction 73 95 - -
Bva13g00037 321 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
Bva13g00037 321 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Bva13g00037 321 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00037 Bva-Chr13 165532 166497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00037 9 77 AP2-EREBP Transcription Factor Family AT5G19790 64.286 8.66e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g00037 AP2 3.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00037 - - gmx:102661478 246.899