Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00036 ATGAAGACTTGTGAAGAATGGAAACCTTTTCTAGTGATGATAGCTATCGATTCTGCTTTTGCTACAGTGAACATTCTTCTCAAGAAAATCCTTGAAGAGGGAATCAACCATCTGGTTTTCATCACATACCGGCTGTCAATTTCTACCATATTCTTGGCCCCAATTGGCTACTTTTTGGAAAGAAATAGCAGACCACAGCTCTCATTTCGGATTTTGTGTTACCTCTTCTTCAGTGCTATTGTCGGGTCATCAATCAcacaatattttttccttctggGAATCCAATACACCTCTGCTACCTTTGCATGTGCCTTTATGAATATGGTGCCCGTACTGACATTCATTATGGCATTACCGTTTGGGTTAGAGACTGTGAACATAAAATGCAACAGTGGAAGAGCCAAGATACTTGGCACATTGATCTGCATCTCTGGTGCAGCGTTGCTGACACTTTATAAAGGAAAGTCTTTGTTTAACAACGATTCTCACTATCGGTTAGCCACGAGTTCTGCAGTGAAGGTGGCTTCTTCTACAAGAAACACTGAGAGATGGACAATTGGTGTAATAGCTTTGATTGTGGGGACCTTGTTTTGGTCTTCTTGGTTTATTTTGCAATCAAATATTGGGAAGAGATACCCATGCCAGTATTCTAGTACAGCTATCATGACCTTCTTTGGAGCCATTCAATCTGCTATCCTTAGTTTGTCCACCGACAGGAACTTGTCCATGTGGGTGTTGAAGGGAAAGATTGAGATAATCACTGTTCTGTATTCTggGATGGTTGGATCAGGATTGTGCTATGTGGGGATGTCATGGTGTGTCAAGAAAAGGGGTCCTGTCTTCACTGCAGCATTCAGCCCTCTTGTCCAAATAATGGCAGCCATGATTGATATCCCTGTTTTGCATGAGCAACTCCACCTAGGAAGTTTGCTGGGGTCCATATTGGTGATGATTGGATTGTACATAGTTCTATGGGGAAAGAACAAGGAGATGCAGAATCGTGTGACCAAGATAGTCCAAGAAGGTGAAGAAATCAAAGAGCAAGAGCCGCAAAAACAACAACACATCATAGTGACCTGTGATTCAAGATTGCATTG 1097 0.4129 MKTCEEWKPFLVMIAIDSAFATVNILLKKILEEGINHLVFITYRLSISTIFLAPIGYFLERNSRPQLSFRILCYLFFSAIVGSSITQYFFLLGIQYTSATFACAFMNMVPVLTFIMALPFGLETVNIKCNSGRAKILGTLICISGAALLTLYKGKSLFNNDSHYRLATSSAVKVASSTRNTERWTIGVIALIVGTLFWSSWFILQSNIGKRYPCQYSSTAIMTFFGAIQSAILSLSTDRNLSMWVLKGKIEIITVLYSGMVGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPVLHEQLHLGSLLGSILVMIGLYIVLWGKNKEMQNRVTKIVQEGEEIKEQEPQKQQHIIVTCDSRLH 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00036 365 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Bva13g00036 365 Pfam EamA-like transporter family 13 150 IPR000620 GO:0016020|GO:0016021
Bva13g00036 365 PANTHER WAT1-RELATED PROTEIN 9 344 IPR030184 GO:0016021|GO:0022857
Bva13g00036 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Bva13g00036 365 Coils Coil 328 348 - -
Bva13g00036 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 329 - -
Bva13g00036 365 PANTHER WAT1-RELATED PROTEIN 9 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00036 Bva-Chr13 159451 162020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00036 1 332 Nodulin-like Gene Family AT1G11460 40.240 6.65e-94 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00036 - - gmx:100803670 562.762