Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00033 atGGATCAGGCTAGAGAGCAAGGAAGTGGTGAGGTATTGGATCTTGTTGATGAAGGGATGGATAAGAAATTGAGCCATTCTGTTGAAGGGCTTGCTGTAACCACGGACAGCTTGGATGAGAGAGCTAGTATAAGCGGAAAAGATGGGACTTCAAAGGGGATGGATAAGGACCTGGGATCGAATAAGCAACTGCAGGAGGGATCTGAGGAACTTACAGATCATGGCACGCATGATCAGCCGAACAACAGTGAGACATTGCATGGACTTGATCAAGGAACTAGTTTTACTGCCGGAAATTTGCTTTATGAAGGAGTACTTGATGCTGTGGTTGTAATAGATTCTTCTGGATCAGATGATGTGAGTGGAGATAATAGGAAATTGGAAGGAAAGGTTAATGAATCAGGGTTGAGCAAGGTACATGCGAGTGCACCAAAAAGGGTTTCTGAAAGAGATAACAATTCGTGTGTAATTGATATAAAGTGCAGCAGCTACAAAGGTATCAGTGAGAATTTGGATGGTGAAAGAATTTGTAGGATTTGTCATCTGGCTTCTGGGCAATCATCAGATGCAACATTTGTTCGTGCTACTAATGATGCTCTGAATTCAGAGTTGATTCAGCTTGGTTGTGCCTGTAAGGATGAGCTAGGCATTGCCCACAGTCATTGTGCCGAGGCATGGTTCAAGCTTAAAGGAAACAGATTTTGTGAAATATGCGGTGAGACTGCAAAAAATGTTACGGGCGTTGTCGATAATGGATTTATGGAAGAGTGGAATGAAAGAAGATTCCTCGACAGTGGTATCGGCTCATCAGGCATGTTTCGTAGATGCTGGCGAGGACAACCATTTTGTAACTTCTTGATGGCATGCCTCGTAATAGCTTTTGTTCTTCCGTGGTTCTTTCGTGTAAATATGTTTTA 917 0.4286 MDQAREQGSGEVLDLVDEGMDKKLSHSVEGLAVTTDSLDERASISGKDGTSKGMDKDLGSNKQLQEGSEELTDHGTHDQPNNSETLHGLDQGTSFTAGNLLYEGVLDAVVVIDSSGSDDVSGDNRKLEGKVNESGLSKVHASAPKRVSERDNNSCVIDIKCSSYKGISENLDGERICRICHLASGQSSDATFVRATNDALNSELIQLGCACKDELGIAHSHCAEAWFKLKGNRFCEICGETAKNVTGVVDNGFMEEWNERRFLDSGIGSSGMFRRCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00033 305 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 305 - -
Bva13g00033 305 MobiDBLite consensus disorder prediction 41 55 - -
Bva13g00033 305 PANTHER ZINC FINGER, RING-CH-TYPE 1 305 - -
Bva13g00033 305 SMART ringv_2 176 239 IPR011016 GO:0008270
Bva13g00033 305 MobiDBLite consensus disorder prediction 27 90 - -
Bva13g00033 305 SUPERFAMILY RING/U-box 174 241 - -
Bva13g00033 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 249 IPR013083 -
Bva13g00033 305 Pfam RING-variant domain 177 238 IPR011016 GO:0008270
Bva13g00033 305 ProSiteProfiles Zinc finger RING-CH-type profile. 169 245 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00033 Bva-Chr13 152674 155993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00033 108 304 C3H Transcription Factor Family AT5G05830 36.364 3.07e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00033 - - gmx:100791129 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00033 13 152674 155993 Bva13g00033 13 152674 155993 ECH