Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00032 ATGGTTTTTACTGATGCCAAGTTGGCTCTGGCTTTGAGCTTGGAAATGTCAGCCTCTGTTGTTAATGGGAATGATTCACTTACTGGTCACATCATATCGACAACAATTGGAGGCAAAAATGGGGAGCCTAAACAGACCATTAGTTACATGGCAGAACGTGTTGTGGGATCTGGATCATTTGGAGTTGTTTTCCAGgCAAAATGCTTGGAAACTGGTGAGACAGTTGCCATTAAAAAGGTTTTACAAGACAGAAGATATAAGAATCGTGAACTACAGTTAATGCGTGTGATGGACCATCCAAATGTGATCTCTCTGAAGCATTGTTTCTTTTCCACTACAAGTACAAATgaactttttcttaatttggtgATGGAATATGTTCCAGAGACCATGTTTCGTGTCCTAAAGCATTATTTTGATGCAAAACAGAGAATGCcacttatttatgtaaaaCTTTATATGTACCAGATTTTTAGGGGGTTGGCTTATATCCACACAGTTCCTGGAGTTTGCCACAGAGATTTGAAGCCACAAAACATACTGGTTGATCCTCTTACTCATCAGGTTAAGCTCTGTGATTTTGGAAGTGCAAAAATGCTGGTTAAAGGCGAAGCTAACATATCATACATCTGTTCACGCTTCTATCGAGCTCCAGAACTTATATTTGGTGCCACAGAGTATACTACTTCAATTGATATTTGGTCAGCTGGGTGTGTCCTTGCTGAACTCCTTTTGGGCCAGCCATTGTTTCCTGGTGAAAGTGCAGTGGATCAGCTTGTGGAGATTATAAAGGTGCTTGGGACACCCACTCGGGAGGAAGTTCGCTGTATGAATCCCAATTATAATGACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGGTTTTCCACAAAAAGATGCCTCCAGAAGCAATTGATCTTGCCTCCCGGCTTCTCCAATACTCTCCAAGCCTTCGATGTACAGCGCTAGAAGCATGCGCCCATTCTTTCTTTGATGAACTCCGAGAACCCAATGCCCGTCTGCCCAATGGTCGTCCATTTCCACCTCTGTTCAACTTCAAACAGGAATTATCTGGAGCGTCTCCCGAGCTTGTTAATAAGTTGATACCTGATCATGTGAAGCGGCAAATAGAGCTACAATTTGTGCATCTGACTGGAACATA 1169 0.414 MVFTDAKLALALSLEMSASVVNGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGSGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSTNELFLNLVMEYVPETMFRVLKHYFDAKQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDPLTHQVKLCDFGSAKMLVKGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHSFFDELREPNARLPNGRPFPPLFNFKQELSGASPELVNKLIPDHVKRQIELQFVHLTGT 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00032 389 Pfam Protein kinase domain 49 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00032 389 PANTHER OS02G0236200 PROTEIN 15 382 - -
Bva13g00032 389 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 15 382 - -
Bva13g00032 389 Gene3D Phosphorylase Kinase; domain 1 34 128 - -
Bva13g00032 389 SMART serkin_6 49 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00032 389 ProSitePatterns Protein kinases ATP-binding region signature. 55 79 IPR017441 GO:0005524
Bva13g00032 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Bva13g00032 389 CDD STKc_GSK3 44 336 IPR039192 -
Bva13g00032 389 Gene3D Transferase(Phosphotransferase) domain 1 129 376 - -
Bva13g00032 389 ProSiteProfiles Protein kinase domain profile. 49 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00032 389 SUPERFAMILY Protein kinase-like (PK-like) 48 358 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00032 Bva-Chr13 147325 151425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00032 55 336 Core Cell Cycle Gene Families AT3G48750 35.739 1.02e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bva13g00032 Pkinase 3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00032 K14502 - gmx:100779909 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00858 14 4069259 4074847 Bva13g00032 13 147325 151425 BWGD
Bva13g00032 13 147325 151425 Bva13g00032 13 147325 151425 ECH