Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00025 ATGGGGCTTAGACGGGTGCCATTTGGATTTTGGTTCCGATTTTATGTTGGTTTGGTTTCTCTGTGGGGAATTCGTGAGTGCTACTCCCTTAATGATGAAGgATTAGCTTTGTTGGAGTTCCGGGGAAGAATAACTTCTGATCCTTATGCTGCTTTATCAAATTGGAATCCAAATGATTCTGACCCATGTAATTGGTGGGGTGTTAAATGCGTCGACGGTAATGTGCAAATTCTGGACCTCAAAGGGCTATATCTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTCAGTCACTTGAAATCTCTTGTTTTATgcaaaaataagttttctgGTATCATCCCCCAAGAACTTGGAGATCTGACCAAGCTGGAGTTATTGGATTTAAGGGAGAATAACTTGTCTGGAAAAATTCCTGTAGAAATTGGCAAGTTGTTGTTGCTAAAGAACTTTGACATGGACAGTGAGTGGCAGAGCAATTTCAGACAATGGAACAAGCCAGATTctttagttaatattaaagGAGTGCTAGTAAAATACTTCAATTTCTTGGCGCTGCCATTGTTCAAGCTAGGAAAGGCCACCCTTCATGACAGTGAAGAGAATTGCCGTGATGACCTGCACAGTTCTGCTGAGACAGAGCTGTTCCAGAATGTACCAGATCTTGTCAACCTTGCACATCGCAGGTTATTTGTTGAATCCAGTAACCTTGCAGCTGCACCTGTTGGTGGTGGGCTTACCCATCAGATCATTTCTCTTCCAACTACCCTGAGTAGTGGATCTTTCCCAGCTGTGCCAGATGACAAGAAACAAAACCAGCCACCTTCGCCTTCACCTCATACTTTGAATCAAGACCAGTCTTCTGCTGAAAATCAAGCAAATCGTCCTTCTTCTGGAAATTTGTGGAAGTATATAATTGTTGTTGCAGGCGTGGCTATCTTGTTCCTTATTGCTTTGGCCATGTTTTGCATTTGGAAAAAACGAGGTGCCAAAACAATAAGCCCCTGGAAGACAGGAATAAGTGGGCAGTTACAGAAAGCATTTGTAACAGGGGTGCCCAAGCTGAATAGAGCAGAGCTGGAGAATGCCTGTGAGGATTTCAGCAATATCATTGATACCGTGGAAGATATCATCATATATAAGGGAACATTGTCCAGCGGAGTCGAGATTGCTGTTGTTTCTACTCTTGTTGATTCTTCTAAAGACTGGTCAAGAAGCATGGAGATGGCCTACAGGAAAATGATTGCTACATTGTCACGCATAAATCATAAGAATTTCACCAATCTTATTGGCTATTGCGAGGAAGAACAACCGTTTACTAGGATGATGGTGTTTGAGTATGCTCCAAACGGAACCCTATCTGAGCATCTGCACGTTAAGGAAGTTGAAAATCTCGATTGGAGTGCTAGGATGAGGGTCATTATGGGGACAGCTTATTGTCTTCAGTACATGCACCACGATTTGAATCCACCCGTAGTTCATTCCAACCTTACATCAGAGTCTATCTTCTTAACAGATGATTATGCCGCCAAAATTGCAGACATATCATTTGGCAAGAGAACTAAACCATTCAAGTCAAACGAGGAAGCATCAAAGTCTACCGAATTGCCACCCCATGCTGATCCCGAGACAAATGTTTATGACTTTGGAATATTATTACTGGAAATCATTTCTGCCAAATCACCATACTCTAAGGAAGAAGGCAACCTTGCGGACTGGGCTGCTCAATACCTTAATGACCAGCGAGGCATCAACTATATGATCGATCCCTCCCTGCAGTCCATCAAGAACAACGAACTCGATGTTATCTGCGAGGTGATCCGAGATTGCATTCAATCCGATCCGAGGTTAAGACCGACAATGAAGGACATAACCTTAAAACTGAGGGAAGTCCTGGGTATATCACCAGAACAAGCAGTGCCAAGGCTTTCCCCACTGTGGTGGGCGGAACTGGAGATCTTGTCGGTGGAGGCGACTTG 1976 0.4312 MGLRRVPFGFWFRFYVGLVSLWGIRECYSLNDEGLALLEFRGRITSDPYAALSNWNPNDSDPCNWWGVKCVDGNVQILDLKGLYLEGTLAPELGKLSHLKSLVLCKNKFSGIIPQELGDLTKLELLDLRENNLSGKIPVEIGKLLLLKNFEWQSNFRQWNKPDSLVNIKGVLVKYFNFLALPLFKLGKATLHDSEENCRDDLHSSAETELFQNVPDLVNLAHRRLFVESSNLAAAPVGGGLTHQIISLPTTLSSGSFPAVPDDKKQNQPPSPSPHTLNQDQSSAENQANRPSSGNLWKYIIVVAGVAILFLIALAMFCIWKKRGAKTISPWKTGISGQLQKAFVTGVPKLNRAELENACEDFSNIIDTVEDIIIYKGTLSSGVEIAVVSTLVDSSKDWSRSMEMAYRKMIATLSRINHKNFTNLIGYCEEEQPFTRMMVFEYAPNGTLSEHLHVKEVENLDWSARMRVIMGTAYCLQYMHHDLNPPVVHSNLTSESIFLTDDYAAKIADISFGKRTKPFKSNEEASKSTELPPHADPETNVYDFGILLLEIISAKSPYSKEEGNLADWAAQYLNDQRGINYMIDPSLQSIKNNELDVICEVIRDCIQSDPRLRPTMKDITLKLREVLGISPEQAVPRLSPLWWAELEILSVEAT 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00025 654 MobiDBLite consensus disorder prediction 269 290 - -
Bva13g00025 654 PANTHER PROTEIN MALE DISCOVERER 2 1 654 - -
Bva13g00025 654 MobiDBLite consensus disorder prediction 257 290 - -
Bva13g00025 654 SUPERFAMILY L domain-like 28 168 - -
Bva13g00025 654 Gene3D Phosphorylase Kinase; domain 1 336 442 - -
Bva13g00025 654 ProSiteProfiles Protein kinase domain profile. 325 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00025 654 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Bva13g00025 654 Pfam Protein tyrosine and serine/threonine kinase 388 622 IPR001245 GO:0004672|GO:0006468
Bva13g00025 654 Gene3D Transferase(Phosphotransferase) domain 1 443 633 - -
Bva13g00025 654 PANTHER LRR RECEPTOR-LIKE KINASE 1 654 - -
Bva13g00025 654 Gene3D Ribonuclease Inhibitor 29 217 IPR032675 -
Bva13g00025 654 SUPERFAMILY Protein kinase-like (PK-like) 374 621 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00025 Bva-Chr13 121618 127403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00025 27 628 Receptor kinase-like Gene Family AT2G42290 26.829 1.55e-50 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Bva13g00025 PK_Tyr_Ser-Thr 1.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00025 - - lang:109337921 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00025 13 121618 127403 Bva13g00025 13 121618 127403 ECH